{"id":"W1963782527","doi":"10.1080/03079457.2014.916395","title":"Genotyping of infectious bronchitis viruses identified in Canada between 2000 and 2013","year":2014,"lang":"en","type":"article","venue":"Avian Pathology","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"University of Guelph; Poultry Industry Council","keywords":"Flock; Infectious bronchitis virus; Outbreak; Genotyping; Virology; Vaccination; Biology; Veterinary medicine; Virus; Avian infectious bronchitis; GenBank; Genotype; Medicine; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001213753,0.00007913688,0.0001980889,0.00001711444,0.00009477513,0.000006230362,0.00006753256,0.00005157062,0.00006999259],"category_scores_gemma":[0.0000645618,0.00003852057,0.00001887,0.0001410053,0.00008785273,0.00003967489,0.00006936986,0.00008152743,0.00001000379],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005707732,"about_ca_system_score_gemma":0.00002128796,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.804984,"about_ca_topic_score_gemma":0.9832392,"domain_scores_codex":[0.9993083,0.0001015153,0.0001855231,0.0001718285,0.0000536128,0.0001791942],"domain_scores_gemma":[0.9996333,0.0002055342,0.00006927361,0.0000345897,0.00002420983,0.00003307708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00000247041,0.000007024586,0.9510163,0.000003559283,0.000005268638,0.000004040086,0.00007415554,0.000002312564,0.01555938,0.00009344482,0.0001008564,0.03313119],"study_design_scores_gemma":[0.00007839193,0.0001013629,0.9962453,0.000007269019,0.000006576951,0.00001290859,0.00008985361,0.000003734255,0.0006872308,0.0004880981,0.002199627,0.00007967566],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985171,0.0002138732,0.000009022062,0.0001645344,0.00008223503,0.00006946522,0.00002340947,0.00001384218,0.0009065031],"genre_scores_gemma":[0.9996306,0.00006471013,0.00001972553,0.0001739359,0.00007040452,0.000006773796,0.000003838331,7.050733e-7,0.00002932681],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1782552,"threshold_uncertainty_score":0.1963146,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01589418472613479,"score_gpt":0.2077670116104882,"score_spread":0.1918728268843534,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}