{"id":"W1963828658","doi":"10.1186/1471-2164-8-130","title":"Genes encoding pentatricopeptide repeat (PPR) proteins are not conserved in location in plant genomes and may be subject to diversifying selection","year":2007,"lang":"en","type":"review","venue":"BMC Genomics","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":153,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Canadian Food Inspection Agency","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Pentatricopeptide repeat; Gene; Genome; Genetics; Brassica rapa; Arabidopsis; Gene family; Arabidopsis thaliana; Negative selection; Mutant","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004533637,0.0005020674,0.0009057924,0.0009678117,0.0001767713,0.0001438681,0.0003630713,0.0001772605,0.000008055102],"category_scores_gemma":[0.0005480882,0.0005234107,0.000131396,0.001082304,0.00006600012,0.000104732,0.0002776951,0.000310015,0.00002359994],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007023413,"about_ca_system_score_gemma":0.0005636858,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002060234,"about_ca_topic_score_gemma":0.002626766,"domain_scores_codex":[0.9965914,0.0005966141,0.0007984563,0.001209309,0.0002819042,0.0005222666],"domain_scores_gemma":[0.9985277,0.0004676037,0.0004410143,0.000338308,0.00005438571,0.0001709549],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001409325,0.001226075,0.1273405,0.06006686,0.00009804284,0.00101184,0.004754444,0.01466793,0.224968,0.0002964185,0.0003638542,0.5637967],"study_design_scores_gemma":[0.003922215,0.0009536996,0.03140724,0.01289807,0.000919908,0.0007500973,0.001829559,0.0009419824,0.4941816,0.00004824451,0.4461882,0.00595918],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.4912727,0.5040306,0.0001750925,0.00002492116,0.0002699938,0.003894681,0.0002221852,0.00005061776,0.00005917991],"genre_scores_gemma":[0.03780264,0.9599408,0.001302212,0.0002378047,0.0001526463,0.0002868978,0.00005324934,0.00008941534,0.0001343191],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.5578375,"threshold_uncertainty_score":0.9997218,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1788633124752882,"score_gpt":0.3367797286322302,"score_spread":0.1579164161569419,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}