{"id":"W1963933633","doi":"10.1371/journal.pone.0071328","title":"Whole Genome Duplication and Enrichment of Metal Cation Transporters Revealed by De Novo Genome Sequencing of Extremely Halotolerant Black Yeast Hortaea werneckii","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":108,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; BC Cancer Agency; Canada's Michael Smith Genome Sciences Centre","funders":"European Regional Development Fund; Ministrstvo za visoko šolstvo, znanost in tehnologijo; Javna Agencija za Raziskovalno Dejavnost RS","keywords":"Biology; Halotolerance; Genome; Gene; Genetics; Gene duplication; Whole genome sequencing; ATP-binding cassette transporter; Transporter","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001940342,0.0003419127,0.0004663088,0.0007220866,0.0002440117,0.0005665243,0.0002619105,0.0002878247,0.0005820728],"category_scores_gemma":[0.0004577794,0.0002027811,0.0005572973,0.0008793486,0.000133604,0.0001924718,0.0003786076,0.0003669526,0.0004267824],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002006844,"about_ca_system_score_gemma":0.0002472953,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001320149,"about_ca_topic_score_gemma":0.002298337,"domain_scores_codex":[0.9998469,0.00001191679,0.00001422736,0.00007170402,0.00003554898,0.00001966291],"domain_scores_gemma":[0.9997578,0.00006764247,0.0000597134,0.00003596286,0.00003714559,0.00004170409],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002678351,0.0000226559,0.008876252,0.00026587,0.00008230653,0.0005388339,0.0002551687,0.0004792152,0.9791508,0.00009583239,0.0001931674,0.009772005],"study_design_scores_gemma":[0.00007093432,0.0003291388,0.8158266,0.0001175292,0.0005202056,0.002667819,0.0006389724,0.005691792,0.15108,0.0004447922,0.02254882,0.0000633745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.979718,0.0009832376,0.005624638,0.00006199892,0.00001996057,0.00004173146,0.01251875,0.00014177,0.0008898136],"genre_scores_gemma":[0.9320891,0.001397322,0.0176105,0.00006885533,0.00001784598,0.0001133366,0.04646413,0.0001997079,0.002039104],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001320149,"threshold_uncertainty_score":0.002624869,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0260958978133399,"score_gpt":0.1861231615362997,"score_spread":0.1600272637229598,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}