{"id":"W1963979170","doi":"10.1128/jcm.43.10.5026-5033.2005","title":"Novel Multiplex PCR Assay for Characterization and Concomitant Subtyping of Staphylococcal Cassette Chromosome<i>mec</i>Types I to V in Methicillin-Resistant<i>Staphylococcus aureus</i>","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":1038,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Ministerio de Economía y Competitividad","keywords":"Subtyping; Multiplex; Multiplex polymerase chain reaction; Staphylococcus aureus; Microbiology; Biology; Staphylococcal infections; Methicillin-resistant Staphylococcus aureus; Polymerase chain reaction; Genetics; Bacteria; Gene; Programming language","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00404106,0.0003634944,0.002122094,0.0004655822,0.00006620119,0.00002176914,0.0003122242,0.0006463028,0.00003185144],"category_scores_gemma":[0.004610494,0.0003038121,0.000519782,0.0003860983,0.0004800402,0.0001573825,0.0001087149,0.0009307707,0.000004962687],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001480872,"about_ca_system_score_gemma":0.0004663875,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002392554,"about_ca_topic_score_gemma":0.0003393157,"domain_scores_codex":[0.9948266,0.0003598434,0.003571133,0.0005132586,0.0001553582,0.0005737638],"domain_scores_gemma":[0.9935408,0.002925391,0.0018434,0.0003418497,0.001004512,0.0003440794],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00607606,0.0006314539,0.02080634,0.0001968528,0.0002440284,0.00002585308,0.0001805933,0.00004975794,0.9638277,0.000122134,0.00060527,0.007233969],"study_design_scores_gemma":[0.02960378,0.006711364,0.2151014,0.002463048,0.0007379202,0.0002193449,0.0002958378,0.0005316531,0.4505529,0.00009925116,0.2925613,0.001122153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9713768,0.0005439911,0.02107364,0.004831295,0.0005409965,0.001072844,0.0005203105,0.0000144137,0.00002570362],"genre_scores_gemma":[0.9682838,0.0003392156,0.02740209,0.002948415,0.0008294516,0.00001354045,0.000057519,0.00005267439,0.0000732942],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5132747,"threshold_uncertainty_score":0.9999414,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0515623613397304,"score_gpt":0.3606561527503346,"score_spread":0.3090937914106042,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}