{"id":"W1964042787","doi":"10.1186/1471-2199-10-47","title":"The STAR RNA binding proteins GLD-1, QKI, SAM68 and SLM-2 bind bipartite RNA motifs","year":2009,"lang":"en","type":"article","venue":"BMC Molecular Biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; HEC Montréal; Jewish General Hospital","funders":"National Cancer Institute; Canadian Institutes of Health Research; Multiple Sclerosis Society; Multiple Sclerosis Society of Canada","keywords":"Biology; RNA; Systematic evolution of ligands by exponential enrichment; RNA-binding protein; Messenger RNA; Binding site; Molecular biology; Consensus sequence; Polyadenylation; Genetics; Gene; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005297134,0.0002626758,0.0002204016,0.00008922655,0.0003590031,0.00009067962,0.0003948275,0.0002651002,0.00000985003],"category_scores_gemma":[0.0003793822,0.0001900208,0.0001273257,0.0001732468,0.0002688507,0.000005856775,0.0002026671,0.0002173215,0.00002269899],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002157762,"about_ca_system_score_gemma":0.0001287093,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004668613,"about_ca_topic_score_gemma":0.000087846,"domain_scores_codex":[0.9979267,0.0002805308,0.0002958303,0.0005934923,0.0001558652,0.0007475401],"domain_scores_gemma":[0.998949,0.00004025421,0.0001059319,0.0006021782,0.00008699979,0.0002156256],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001268292,0.00003144954,0.0009638594,0.000009356076,0.00004799192,0.00001350769,0.00001523621,0.00001283623,0.9887162,0.001293494,0.0002773827,0.008491843],"study_design_scores_gemma":[0.001008374,0.001623456,0.002645352,0.00002423683,0.00002134437,0.00004577968,0.00008038028,0.0004287671,0.9713081,0.000980877,0.02142744,0.0004058716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9862502,0.003376343,0.008350147,0.0007472967,0.0000927276,0.0005194775,0.00001965972,0.00002443848,0.0006196774],"genre_scores_gemma":[0.9951894,0.000580184,0.002391455,0.0004617462,0.0001737057,0.00003162295,0.00008685594,0.0000281814,0.001056807],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02115005,"threshold_uncertainty_score":0.7748823,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01315939458412543,"score_gpt":0.288514612868166,"score_spread":0.2753552182840406,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}