{"id":"W1965240831","doi":"10.1139/g01-127","title":"Phylogenetic analysis reveals<i>Stowaway</i>-like elements may represent a fourth family of the IS<i>630</i>-Tc1-<i>mariner</i>superfamily","year":2002,"lang":"en","type":"article","venue":"Genome","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Inverted repeat; Transposable element; ORFS; Phylogenetic tree; Genetics; Genome; SUPERFAMILY; Transposase; Mobile genetic elements; Phylogenetics; Evolutionary biology; Sequence analysis; Open reading frame; Gene; Peptide sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001011015,0.0003269453,0.0002808071,0.0007723174,0.0004191769,0.0003935514,0.000275599,0.0003338165,0.001593358],"category_scores_gemma":[0.0001528969,0.0001018517,0.0003715894,0.0007900135,0.0002032955,0.0002482997,0.0003035514,0.0004932659,0.001258963],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001742166,"about_ca_system_score_gemma":0.0002777025,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001042739,"about_ca_topic_score_gemma":0.001674217,"domain_scores_codex":[0.9999018,0.0000079091,0.000004986637,0.00003916593,0.00002068566,0.00002540594],"domain_scores_gemma":[0.9998497,0.00001906134,0.0000458397,0.00001472684,0.00002625147,0.00004439624],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006021208,0.0001678134,0.0941788,0.0002108583,0.00008489104,0.0007268994,0.0006534531,0.0003873676,0.8656217,0.000488803,0.000234635,0.0366425],"study_design_scores_gemma":[0.00003499787,0.0007272564,0.8602785,0.0001110922,0.0001880304,0.005593986,0.001171414,0.004282153,0.09262402,0.0004669023,0.03447409,0.00004760423],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9936247,0.0007004412,0.003070542,0.00002973991,0.000006555445,0.00003047854,0.0004536539,0.00005434424,0.002029562],"genre_scores_gemma":[0.9814397,0.0006454192,0.006254186,0.00004759692,0.00001003472,0.00003006375,0.008100236,0.00002073838,0.003451989],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001593358,"threshold_uncertainty_score":0.005330265,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02699331899893736,"score_gpt":0.2111048021782392,"score_spread":0.1841114831793019,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}