{"id":"W1965705014","doi":"10.1177/1753425913506950","title":"Complete <i>Bordetella avium, Bordetella hinzii</i> and <i>Bordetella trematum</i> lipid A structures and genomic sequence analyses of the loci involved in their modifications","year":2013,"lang":"en","type":"article","venue":"Innate Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Bordetella; Bordetella pertussis; Bordetella bronchiseptica; Microbiology; Pathogen; Biology; Virulence; Lipid A; Biochemistry; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002026961,0.0006747205,0.0003372517,0.00054268,0.0003175176,0.0004729922,0.0004591617,0.0003868625,0.00193699],"category_scores_gemma":[0.000371946,0.0002535064,0.000490204,0.0008130214,0.0002302295,0.0002699873,0.0004099153,0.0005879031,0.001207595],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005101003,"about_ca_system_score_gemma":0.0004138243,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004910219,"about_ca_topic_score_gemma":0.002514615,"domain_scores_codex":[0.9997068,0.00003722884,0.00003443946,0.00005811761,0.00009339277,0.00007000755],"domain_scores_gemma":[0.9997326,0.00003051461,0.00008610624,0.00004688512,0.00006190535,0.00004203228],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007986389,0.00008124827,0.003174716,0.0002062258,0.00003756919,0.0001919375,0.00007761094,0.0000902846,0.9900366,0.0002058833,0.0003058098,0.004793536],"study_design_scores_gemma":[0.0001891649,0.001489322,0.2191449,0.00008937281,0.0003237142,0.003605787,0.000595184,0.0008432916,0.7024446,0.0004634732,0.07075997,0.00005128183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9828733,0.002808891,0.002276037,0.0002024118,0.00009596234,0.0001103538,0.00779192,0.0001084596,0.00373277],"genre_scores_gemma":[0.9070755,0.001919695,0.006710906,0.0003845133,0.00004302676,0.0002311624,0.07387663,0.00008903779,0.009669567],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004910219,"threshold_uncertainty_score":0.0097633,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04876167117828868,"score_gpt":0.280358282204719,"score_spread":0.2315966110264303,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}