{"id":"W1966104891","doi":"10.1378/chest.13-2058","title":"Risk of Mycobacterial Infections Associated With Rheumatoid Arthritis in Ontario, Canada","year":2014,"lang":"en","type":"article","venue":"CHEST Journal","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":false,"ca_institutions":"McMaster University; Institute for Clinical Evaluative Sciences; Public Health Ontario; Toronto General Hospital; University Health Network; University of Toronto; West Park Healthcare Centre","funders":"Takeda Canada; Lung Health Foundation; MedImmune; University Health Network; University of Toronto; Connaught Fund; Ontario Ministry of Health and Long-Term Care; Institute for Clinical Evaluative Sciences; Amgen","keywords":"Medicine; Rheumatoid arthritis; Internal medicine; Nontuberculous mycobacteria; Hazard ratio; Proportional hazards model; Disease; Cohort; Tuberculosis; Immunology; Mycobacterium; Confidence interval; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004984058,0.0001014785,0.0003281067,0.000116947,0.0000862551,0.00003054236,0.00006005421,0.00006195882,0.001014323],"category_scores_gemma":[0.001470456,0.00007972706,0.00005178535,0.0001630732,0.00004753795,0.00008501246,0.00001636379,0.000639394,0.000003091852],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000575197,"about_ca_system_score_gemma":0.002416749,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.89253,"about_ca_topic_score_gemma":0.9963862,"domain_scores_codex":[0.9988229,0.0001193611,0.0003166403,0.0001039146,0.0003455565,0.0002916812],"domain_scores_gemma":[0.9989531,0.0002293799,0.0001974432,0.0001262458,0.0001921747,0.0003016287],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001487628,0.000173771,0.995761,0.00001111812,0.00008580244,0.00006817501,0.000111724,0.000009407281,0.0005566687,0.000007555714,0.002104676,0.0009612829],"study_design_scores_gemma":[0.003258062,0.0005967144,0.9858853,0.0004973252,0.00001766728,0.0002684924,0.00002843724,0.00001379996,0.0009514515,0.00003856224,0.008363118,0.00008111255],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976487,0.00004757074,0.00003397886,0.0001947964,0.0002241673,0.00009569772,0.00001435929,0.000007207291,0.001733548],"genre_scores_gemma":[0.9991104,0.0005110885,0.0001034669,0.00005059719,0.0001080949,0.000007150607,0.00001926163,0.00001204037,0.0000778856],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1038562,"threshold_uncertainty_score":0.9998989,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008839611165161507,"score_gpt":0.216357557013079,"score_spread":0.2075179458479174,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}