{"id":"W1966489066","doi":"10.4161/epi.2.1.3880","title":"Variations in DNA Methylation Patterns During the Cell Cycle of HeLa Cells","year":2007,"lang":"en","type":"article","venue":"Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"DNA methylation; Biology; CpG site; Methylation; Epigenome; Illumina Methylation Assay; Epigenetics of physical exercise; Cell cycle; DNA; Genetics; Somatic cell; Molecular biology; Epigenomics; Methylated DNA immunoprecipitation; RNA-Directed DNA Methylation; Differentially methylated regions; Cell biology; Cell; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005648345,0.0001160418,0.000107813,0.00007598021,0.00006822708,0.00001185158,0.0001643324,0.0001375234,0.00001863549],"category_scores_gemma":[0.00004046202,0.0001037627,0.00006541933,0.0001640349,0.00003626668,0.000002586976,0.00007278783,0.00008620244,0.000004558248],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001800216,"about_ca_system_score_gemma":0.00003183289,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005267383,"about_ca_topic_score_gemma":0.0003608149,"domain_scores_codex":[0.9989383,0.00007655947,0.0003843551,0.0002139217,0.0001590672,0.0002278638],"domain_scores_gemma":[0.9993076,0.00005203714,0.00015591,0.0003588903,0.00007859735,0.00004693445],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001503771,0.00006560703,0.03377848,0.00002033371,0.000008775616,8.925414e-7,0.0002092031,0.003768963,0.9606359,0.00003157877,0.000003535897,0.001461694],"study_design_scores_gemma":[0.0002456763,0.00005793233,0.2415011,0.000004984921,0.000008725039,2.262435e-7,0.00006267296,0.0001462058,0.7569445,0.0001809589,0.0007559279,0.00009103202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9632117,0.0009569561,0.03442437,0.00003481309,0.0001698854,0.0001919476,0.00001945805,0.000004726295,0.0009861545],"genre_scores_gemma":[0.997499,0.0006547613,0.001363026,0.00002191026,0.0001450558,0.000005852494,0.00003774449,0.00002079469,0.0002518586],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2077226,"threshold_uncertainty_score":0.4231321,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005971886351947103,"score_gpt":0.2387059001575957,"score_spread":0.2327340138056486,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}