{"id":"W1966857950","doi":"10.1038/sj.emboj.7601918","title":"The structural basis of cyclic diguanylate signal transduction by PilZ domains","year":2007,"lang":"en","type":"article","venue":"The EMBO Journal","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":224,"is_retracted":false,"has_abstract":false,"ca_institutions":"Structural Genomics Consortium","funders":"Brookhaven National Laboratory; National Institutes of Health; Yale University","keywords":"Biology; Signal transduction; Transduction (biophysics); Cell biology; Computational biology; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001293251,0.0003543837,0.0002508046,0.0001619655,0.0004434446,0.0005069635,0.0004034594,0.0005361466,0.001148679],"category_scores_gemma":[0.000271428,0.0001974868,0.0002283033,0.0001646918,0.0004492067,0.0004188723,0.0003348441,0.0007492533,0.0005439612],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000664484,"about_ca_system_score_gemma":0.0003828063,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005646282,"about_ca_topic_score_gemma":0.0003967289,"domain_scores_codex":[0.9999262,0.00001070956,0.000004967942,0.00001086857,0.0000192543,0.0000278916],"domain_scores_gemma":[0.9998786,0.00003490337,0.00002246818,0.00001670941,0.00001154128,0.00003579471],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004695322,0.00005537281,0.0004893003,0.00007058165,0.000006248487,0.0005950144,0.00005630143,0.002362412,0.9754353,0.01624639,0.0001765702,0.004036855],"study_design_scores_gemma":[0.00005806496,0.0003760029,0.003188259,0.00001091568,0.00001595248,0.000683043,0.00009427967,0.01350661,0.9744068,0.004733341,0.00290181,0.00002482519],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9885639,0.0005806322,0.00687136,0.0003549896,0.00005982645,0.00003686489,0.0001026003,0.0001679661,0.003261915],"genre_scores_gemma":[0.9984075,0.0001077288,0.0009320982,0.00004405459,0.000008279128,0.000008421648,0.00007185685,0.000007321951,0.0004126714],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001148679,"threshold_uncertainty_score":0.004821241,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004902349127478185,"score_gpt":0.2278399549814921,"score_spread":0.2229376058540139,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}