{"id":"W1967207596","doi":"10.1128/aem.00746-13","title":"Molecular Characterization of âCandidatus Similichlamydia latridicolaâ gen. nov., sp. nov. (Chlamydiales: âCandidatus Parilichlamydiaceaeâ), a Novel Chlamydia-Like Epitheliocystis Agent in the Striped Trumpeter, Latris lineata (Forster)","year":2013,"lang":"en","type":"article","venue":"Europe PMC (PubMed Central)","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Leading Edge Endowment Fund","keywords":"Biology; Candidatus; Chlamydiales; 16S ribosomal RNA; Clade; Zoology; Phylogenetic tree; Taxon; Phylogenetics; Chlamydia; Microbiology; Bacteria; Botany; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001003247,0.0007124622,0.0008737981,0.0006761426,0.0003098213,0.0002277263,0.001113277,0.0004878863,0.001213519],"category_scores_gemma":[0.0004817144,0.0005746429,0.0003990296,0.00179379,0.0004547146,0.0004846248,0.0003829747,0.0009935983,0.0006066721],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002705754,"about_ca_system_score_gemma":0.000449406,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001357857,"about_ca_topic_score_gemma":0.000185582,"domain_scores_codex":[0.9940468,0.0009598986,0.001383845,0.001057682,0.0003197083,0.002232076],"domain_scores_gemma":[0.9970826,0.000278046,0.0005298413,0.001435553,0.0003605949,0.0003133583],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004177881,0.001305656,0.03545579,0.0001617463,0.0003640996,0.00006333633,0.001705444,0.00003146574,0.9513199,0.000292352,0.002440664,0.006441753],"study_design_scores_gemma":[0.008149248,0.0003120655,0.6816701,0.0002012206,0.0003587761,0.0001769679,0.0003154707,0.0001196382,0.1630005,0.00003468874,0.1444137,0.001247576],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9895236,0.002452639,0.0007396389,0.0005748126,0.001227657,0.003451129,0.001162369,0.0001244233,0.0007436893],"genre_scores_gemma":[0.9929622,0.00311696,0.00006478943,0.0007312893,0.0002372967,0.0005242976,0.001664996,0.0001119321,0.0005862137],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7883194,"threshold_uncertainty_score":0.9996995,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01515871339619383,"score_gpt":0.2257089059454902,"score_spread":0.2105501925492964,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}