{"id":"W1967598681","doi":"10.1101/gr.091546.109","title":"Comparative genomics of protoploid <i>Saccharomycetaceae</i>","year":2009,"lang":"en","type":"article","venue":"Genome Research","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":211,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Nautical Research Society","funders":"Agence Nationale de la Recherche","keywords":"Biology; Synteny; Genome; Genetics; Kluyveromyces lactis; Lineage (genetic); Gene duplication; Genome evolution; Comparative genomics; Evolutionary biology; Kluyveromyces; Genomics; Saccharomyces cerevisiae; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009529007,0.0002520867,0.0002012698,0.0005909301,0.0002517478,0.0004538383,0.0001615752,0.0002057885,0.0006751521],"category_scores_gemma":[0.0001693032,0.00009584452,0.000228695,0.0008294844,0.0001170046,0.0001981585,0.0002015384,0.0002495178,0.000269728],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003773327,"about_ca_system_score_gemma":0.0002585541,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002426506,"about_ca_topic_score_gemma":0.002350468,"domain_scores_codex":[0.9999231,0.00001157238,0.000005165827,0.00002878778,0.00001741471,0.00001400936],"domain_scores_gemma":[0.9998953,0.00001942238,0.00002594633,0.00000920505,0.00002136511,0.00002874435],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002840139,0.00001996381,0.007098331,0.0001530183,0.00003039602,0.0001128589,0.000238241,0.0003752725,0.9809757,0.0002979496,0.00008929942,0.01032483],"study_design_scores_gemma":[0.00003798657,0.0005379797,0.8578044,0.0001008949,0.0001421211,0.001883173,0.0009572048,0.002941661,0.1044787,0.0008915215,0.03018985,0.0000345838],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9923221,0.003102046,0.0009845101,0.00005143613,0.000005454274,0.00001076988,0.001856077,0.00003456085,0.001633069],"genre_scores_gemma":[0.9819348,0.003029235,0.003196062,0.0001078226,0.00001415142,0.00003334565,0.009934691,0.00003511331,0.001714751],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002426506,"threshold_uncertainty_score":0.004824758,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0637711639517722,"score_gpt":0.3654396975534254,"score_spread":0.3016685336016532,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}