{"id":"W1967701714","doi":"10.1128/aem.01288-09","title":"Lineage and Host Source Are Both Correlated with Levels of Shiga Toxin 2 Production by <i>Escherichia coli</i> O157:H7 Strains","year":2009,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Lethbridge; Public Health Agency of Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Health Canada; Public Health Agency; Public Health Agency of Canada","keywords":"Biology; Shiga toxin; Prophage; Escherichia coli; Virulence; STX2; Microbiology; Lineage (genetic); Genotype; Shiga-like toxin; Gene; Pathogen; Toxin; Genetics; Bacteriophage","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002157679,0.0002295067,0.0002283177,0.0003263692,0.0001037607,0.000517092,0.0001353897,0.0002497647,0.001128532],"category_scores_gemma":[0.0006618504,0.0002416792,0.0001203462,0.0002636613,0.0001396189,0.0002015638,0.0002949166,0.0003668766,0.0003191102],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001277067,"about_ca_system_score_gemma":0.000102926,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004870786,"about_ca_topic_score_gemma":0.0005527431,"domain_scores_codex":[0.9997073,0.00006739681,0.0000334373,0.00005831562,0.00006453098,0.00006897192],"domain_scores_gemma":[0.9987441,0.0002180875,0.0006060794,0.00008726415,0.0001384135,0.0002058978],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004001082,0.00008628753,0.0976062,0.00003267702,0.00001818185,0.0001043231,0.00009771543,0.00004562454,0.9000888,0.00002185259,0.00003472137,0.001463594],"study_design_scores_gemma":[0.0000141448,0.000652028,0.9038401,0.00001454341,0.0000392792,0.0009022115,0.0003279915,0.0003842138,0.09307376,0.00003873811,0.0007001927,0.00001279058],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994674,0.0001304967,0.0001019123,0.000009511356,8.21814e-7,0.000003457518,0.00009123785,0.000003589399,0.0001915875],"genre_scores_gemma":[0.9986338,0.0001262225,0.0003707672,0.00002658338,0.000004530019,0.000008131956,0.000439988,0.000006535955,0.0003834709],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001128532,"threshold_uncertainty_score":0.003775299,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004551419005233738,"score_gpt":0.1879963246186682,"score_spread":0.1834449056134345,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}