{"id":"W1968615839","doi":"10.1038/nprot.2007.59","title":"Sequencing complete mitochondrial and plastid genomes","year":2007,"lang":"en","type":"article","venue":"Nature Protocols","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal; Canadian Institute for Advanced Research","funders":"","keywords":"Genome; Biology; Heteroplasmy; Computational biology; Mitochondrial DNA; Genomics; DNA sequencing; Genetics; Evolutionary biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007923878,0.001001911,0.0007534526,0.001031328,0.001260914,0.001029304,0.0009030573,0.0009853115,0.004031011],"category_scores_gemma":[0.00107626,0.0008210615,0.0008864749,0.001371357,0.0003519982,0.0009729596,0.0009995122,0.002485632,0.003187319],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006129027,"about_ca_system_score_gemma":0.002378389,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002242218,"about_ca_topic_score_gemma":0.01147695,"domain_scores_codex":[0.999588,0.00004563188,0.00003192291,0.0001466747,0.0001281021,0.0000596922],"domain_scores_gemma":[0.9993178,0.0001165313,0.00005943004,0.0002613008,0.0001368683,0.0001081235],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004035749,0.00007951363,0.0009273104,0.0006555941,0.00008128931,0.000119476,0.0002308881,0.0006640917,0.9392033,0.003569103,0.01069494,0.04337084],"study_design_scores_gemma":[0.0003554026,0.0003604191,0.0450682,0.0002377089,0.0004871166,0.001016737,0.0003041921,0.006414753,0.492039,0.01524814,0.4383507,0.0001176579],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.3452295,0.009918544,0.3602318,0.002237658,0.001685764,0.001667921,0.2412975,0.006730997,0.03100038],"genre_scores_gemma":[0.1760264,0.006394469,0.2315502,0.0009558345,0.0002892379,0.001379276,0.560056,0.001705644,0.02164292],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.004031011,"threshold_uncertainty_score":0.01348507,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01708691119831738,"score_gpt":0.2917854692970592,"score_spread":0.2746985580987418,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}