{"id":"W1968696592","doi":"10.3168/jds.2014-8044","title":"Genotypic and phenotypic characterization of Staphylococcus aureus causing persistent and nonpersistent subclinical bovine intramammary infections during lactation or the dry period","year":2014,"lang":"en","type":"article","venue":"Journal of Dairy Science","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"Cegep de Saint Hyacinthe; Agriculture and Agri-Food Canada; University of Prince Edward Island; Université de Montréal; Université de Sherbrooke","funders":"","keywords":"Biology; Staphylococcus aureus; Lactation; Microbiology; Subclinical infection; Typing; Genotype; Persistence (discontinuity); Veterinary medicine; Bacteria; Gene; Virology; Medicine; Genetics; Pregnancy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001138751,0.00008415989,0.0001659899,0.00003955838,0.0005149987,0.00009834,0.0001649736,0.00004401615,0.00003568043],"category_scores_gemma":[0.0004177008,0.00002863085,0.00006601687,0.0003258721,0.0004945038,0.0004096096,0.00009323492,0.0001534818,4.148806e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003002912,"about_ca_system_score_gemma":0.00004508521,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001864576,"about_ca_topic_score_gemma":0.0001095469,"domain_scores_codex":[0.9988845,0.0001198946,0.0003846563,0.0001568926,0.0002998599,0.0001542049],"domain_scores_gemma":[0.9991406,0.0001656798,0.0003521188,0.00005496535,0.0001816755,0.0001050157],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002184826,0.0001065303,0.04259412,0.00004214955,0.00001921199,0.000003558576,0.001584442,0.00003672317,0.9152914,0.000181923,0.000005784439,0.03991573],"study_design_scores_gemma":[0.0002908483,0.001015209,0.9943009,0.00007584661,0.00004119579,0.00007657809,0.0009826766,0.0008480744,0.001462881,0.00007409682,0.000733718,0.00009797301],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979362,0.00008402218,0.0001452107,0.001467352,0.000226379,0.0000940875,0.000006967726,0.000005932278,0.00003380792],"genre_scores_gemma":[0.9993586,0.0001365956,0.000142052,0.00009890633,0.0002133388,0.000001040505,0.00000211037,6.837886e-7,0.00004668983],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9517068,"threshold_uncertainty_score":0.3961006,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02191961561039952,"score_gpt":0.2435418630237807,"score_spread":0.2216222474133812,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}