{"id":"W1968872877","doi":"10.1126/science.1127404","title":"Metagenomic Analysis of Coastal RNA Virus Communities","year":2006,"lang":"en","type":"article","venue":"Science","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":379,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Metagenomics; RNA; Genome; Virus; Marine bacteriophage; Shotgun sequencing; RNA virus; Evolutionary biology; Genetics; Virology; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002031048,0.00005331106,0.0001053302,0.0001194005,0.0001944775,0.00003906721,0.0003452766,0.00001190762,0.003059938],"category_scores_gemma":[0.000004364561,0.00004730831,0.00006951485,0.001093173,0.0009457697,0.0002994428,0.0002040472,0.00004853116,0.0001086378],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005138425,"about_ca_system_score_gemma":0.00001140259,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.02114126,"about_ca_topic_score_gemma":0.02003879,"domain_scores_codex":[0.999444,0.00001638846,0.0001351263,0.0001095393,0.0001420222,0.0001529024],"domain_scores_gemma":[0.9996467,0.00002031524,0.00006858113,0.0002239149,0.00001044047,0.0000300715],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000001644682,0.0000335579,0.00352566,3.483596e-7,0.00001177672,3.876624e-7,0.0001875047,0.001852758,0.9934865,0.00006615085,0.00007634026,0.0007573555],"study_design_scores_gemma":[0.00004305388,0.00001719241,0.8347418,0.000001746886,0.0001029306,0.000001705843,0.0002662814,0.001392283,0.1595135,0.00004220029,0.003797993,0.00007932731],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9820174,0.00001180717,0.0002656603,0.00002555069,0.00007555764,0.00003194292,0.00004211374,0.00001044765,0.01751954],"genre_scores_gemma":[0.9983776,0.000005679998,0.0006335949,0.00004562714,0.000006161516,0.000001419606,0.000006244036,0.000002260403,0.0009214527],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8339731,"threshold_uncertainty_score":0.9978514,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009754476388032339,"score_gpt":0.2383462067699872,"score_spread":0.2285917303819549,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}