{"id":"W1969031360","doi":"10.1186/1756-0500-7-827","title":"Complete genome sequence and comparative genome analysis of Klebsiella oxytoca HKOPL1 isolated from giant panda feces","year":2014,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Klebsiella oxytoca; Feces; Genome; Biology; Whole genome sequencing; Klebsiella; Genetics; Microbiology; Klebsiella pneumoniae; Gene; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007442416,0.0001516107,0.0004173663,0.0002211206,0.000179471,0.00004923187,0.0002764211,0.0001295364,0.00007521163],"category_scores_gemma":[0.0001644312,0.0001323103,0.00009635247,0.0004675883,0.0003967289,0.000005217296,0.0002212007,0.0001470438,0.00001827802],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002077253,"about_ca_system_score_gemma":0.0001306831,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001239287,"about_ca_topic_score_gemma":0.001968039,"domain_scores_codex":[0.9981071,0.0004782823,0.000287939,0.000485299,0.0002219087,0.0004194485],"domain_scores_gemma":[0.9986817,0.0003184192,0.00009914624,0.0004404957,0.0002945957,0.0001656615],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001499649,0.00003650933,0.01063323,0.00004027481,0.0002879908,9.457397e-7,0.0002461476,0.0001882935,0.9881813,0.00007251548,0.0000522991,0.0001105131],"study_design_scores_gemma":[0.001252686,0.001730437,0.8809689,0.00004630382,0.0002509378,0.000005771386,0.0004567433,0.01487256,0.07002378,0.0002404462,0.02958914,0.0005622616],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937714,0.001701515,0.003291421,0.0001287575,0.00002087449,0.0002590702,0.0005666165,0.000007466127,0.0002528937],"genre_scores_gemma":[0.9966173,0.0006451578,0.001561019,0.00005987854,0.00007994097,0.00001063502,0.0008842319,0.0000104574,0.0001313424],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9181575,"threshold_uncertainty_score":0.539546,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2143895237282846,"score_gpt":0.4082170579531715,"score_spread":0.1938275342248869,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}