{"id":"W1969031360","doi":"10.1186/1756-0500-7-827","title":"Complete genome sequence and comparative genome analysis of Klebsiella oxytoca HKOPL1 isolated from giant panda feces","year":2014,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Klebsiella oxytoca; Feces; Genome; Biology; Whole genome sequencing; Klebsiella; Genetics; Microbiology; Klebsiella pneumoniae; Gene; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001854458,0.0008215397,0.0007596152,0.001269151,0.0006382041,0.0006881399,0.0003785839,0.0005244188,0.00121163],"category_scores_gemma":[0.0004658581,0.0002425263,0.001110113,0.002422882,0.0002744293,0.0003357369,0.0004830242,0.0005611473,0.0006522692],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003863603,"about_ca_system_score_gemma":0.0007310089,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004672287,"about_ca_topic_score_gemma":0.003154086,"domain_scores_codex":[0.9996858,0.00002428763,0.00004027947,0.0001227301,0.00008278126,0.00004419036],"domain_scores_gemma":[0.9996363,0.00006185679,0.000132013,0.00003352387,0.00007898531,0.00005725086],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001954645,0.0003437278,0.02932908,0.001803735,0.0002283367,0.001770597,0.0009557515,0.00115376,0.9246812,0.0001791589,0.001015506,0.03658465],"study_design_scores_gemma":[0.0001100291,0.001489478,0.8140433,0.0002469318,0.001595397,0.006433805,0.001978234,0.004308821,0.1312007,0.0003594896,0.03808001,0.0001538441],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9463356,0.002912696,0.005083766,0.0002087123,0.00006402859,0.0001680329,0.0430511,0.0002706304,0.001905425],"genre_scores_gemma":[0.8048815,0.002809415,0.02405407,0.000129441,0.00004892129,0.0002060144,0.1654872,0.0001911328,0.0021923],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004672287,"threshold_uncertainty_score":0.009290159,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2143895237282846,"score_gpt":0.4082170579531715,"score_spread":0.1938275342248869,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}