{"id":"W1969262464","doi":"10.1007/s12010-008-8241-0","title":"Serine Hydroxamate and the Transcriptome of High Cell Density Recombinant Escherichia coli MG1655","year":2008,"lang":"en","type":"article","venue":"Applied Biochemistry and Biotechnology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"ca_institutions":"Boehringer Ingelheim (Canada)","funders":"National Science Foundation","keywords":"Recombinant DNA; Escherichia coli; Serine; Biochemistry; Biology; Serine protease; Stringent response; Transcriptome; Gene; Gene expression; Enzyme; Protease","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002792128,0.0002858778,0.0005951503,0.0001714958,0.0001903335,0.0005638226,0.0001834992,0.0003320223,0.0007281632],"category_scores_gemma":[0.0002835285,0.0002360897,0.0002869947,0.0002953097,0.0001976177,0.0002930198,0.0002595712,0.0006744604,0.0004257368],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006398661,"about_ca_system_score_gemma":0.0003532252,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002895102,"about_ca_topic_score_gemma":0.003644679,"domain_scores_codex":[0.9997823,0.00003759595,0.00001574333,0.00005965623,0.00006310594,0.00004169115],"domain_scores_gemma":[0.9998435,0.00004196684,0.0000305555,0.00001720594,0.00002623207,0.00004061836],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001755507,0.00001067592,0.000484819,0.00002831502,0.000004293667,0.00001966467,0.00003646054,0.00007771761,0.9978969,0.0000797053,0.00006570074,0.00112018],"study_design_scores_gemma":[0.00002246919,0.0003446259,0.06988314,0.00002010945,0.00004383387,0.0001847214,0.0003730757,0.004095172,0.9170086,0.0003545257,0.007644719,0.00002492719],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9873598,0.00144136,0.004940978,0.0004645523,0.00008043592,0.00002788667,0.003531289,0.0001034857,0.002050269],"genre_scores_gemma":[0.9813367,0.0006116496,0.003993444,0.0002766484,0.00002807841,0.00002786388,0.007228407,0.0001058916,0.006391326],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002895102,"threshold_uncertainty_score":0.005756557,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003924044371876342,"score_gpt":0.1705825404514219,"score_spread":0.1666584960795456,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}