{"id":"W1969933124","doi":"10.1371/journal.pone.0036518","title":"Pseudomonas syringae pv. actinidiae (PSA) Isolates from Recent Bacterial Canker of Kiwifruit Outbreaks Belong to the Same Genetic Lineage","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":140,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Regione Lazio; Agence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du Travail; Ministero delle Politiche Agricole Alimentari e Forestali; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Università degli Studi della Tuscia; Shizuoka University; Sunchon National University; National Science Foundation","keywords":"Biology; Actinidia; Lineage (genetic); Genetics; Pseudomonas syringae; Genome; Outbreak; Canker; Genetic diversity; Gene; Botany; Virology; Population","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001624976,0.0003678488,0.0002751972,0.0005463259,0.0005842205,0.0004803222,0.0001660728,0.0003444469,0.0005760253],"category_scores_gemma":[0.0003753831,0.0001432406,0.0003134431,0.0006902102,0.0002620896,0.0002110852,0.0003229789,0.0003333509,0.0002447655],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002150267,"about_ca_system_score_gemma":0.0002889451,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007631282,"about_ca_topic_score_gemma":0.0131854,"domain_scores_codex":[0.9997254,0.00001608146,0.00002912842,0.0001062321,0.00006035054,0.0000628483],"domain_scores_gemma":[0.9996998,0.00004000418,0.00008923147,0.0000285326,0.00008177773,0.00006062906],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004332446,0.0002743318,0.2122729,0.0001682585,0.0001034755,0.001164897,0.001405788,0.0001064068,0.7759113,0.0000703215,0.0001142959,0.007974757],"study_design_scores_gemma":[0.00001348672,0.0002986829,0.9686669,0.00001599637,0.0001151824,0.002395371,0.0009182052,0.0001812499,0.02595008,0.00002747001,0.00140343,0.00001380898],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989939,0.00008850239,0.000177866,0.00001202408,0.000003841176,0.00002014136,0.0002296988,0.000005151712,0.0004688897],"genre_scores_gemma":[0.9968739,0.0001424273,0.0006993671,0.00003535874,0.000005173851,0.00002037721,0.001605788,0.000006414261,0.0006110868],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007631282,"threshold_uncertainty_score":0.01517373,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05609526637720821,"score_gpt":0.2118964472753555,"score_spread":0.1558011808981473,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}