{"id":"W1970166425","doi":"10.1006/jmbi.2000.4135","title":"Substrate recognition and induced DNA deformation by transposase at the target-capture stage of Tn10 transposition","year":2000,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":false,"ca_institutions":"Western University","funders":"Medical Research Council","keywords":"Tn10; Transposase; Transposable element; DNA; Biology; Base pair; Insertion sequence; Transposition (logic); Genetics; Consensus sequence; Mutant; Biophysics; Gene; Base sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000285531,0.0002815945,0.0002042818,0.0001306427,0.0002344882,0.0005375916,0.0003679828,0.0004915534,0.001805429],"category_scores_gemma":[0.0005311524,0.000390325,0.0003040339,0.0001085155,0.0003850761,0.0003593094,0.0003242176,0.0007594874,0.0005074837],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005602043,"about_ca_system_score_gemma":0.0002429202,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009150574,"about_ca_topic_score_gemma":0.001287835,"domain_scores_codex":[0.9997576,0.00003695961,0.00001347513,0.00003905876,0.00007542931,0.00007754395],"domain_scores_gemma":[0.9996943,0.0001205397,0.00003739208,0.00004809305,0.00003398007,0.00006568759],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001403002,0.0000193716,0.0003145546,0.00001706125,0.000002975233,0.00007688332,0.00002630623,0.0001393507,0.9981337,0.0002735633,0.00002470844,0.0008312779],"study_design_scores_gemma":[0.00001042206,0.0001077304,0.004987899,0.000002433202,0.000002617877,0.0001121358,0.00003624858,0.00153659,0.9929456,0.00004607051,0.0002054029,0.000006956926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967861,0.0001813798,0.001785303,0.00003357443,0.00001482014,0.000009972485,0.000022701,0.00002759451,0.001138469],"genre_scores_gemma":[0.998292,0.00004844783,0.0004627748,0.00001442227,0.000002132099,0.00000562788,0.00006685298,0.00001182172,0.001095879],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001805429,"threshold_uncertainty_score":0.006039739,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007972450070292425,"score_gpt":0.2209910056163333,"score_spread":0.2130185555460408,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}