{"id":"W1970517964","doi":"10.1371/journal.pone.0008842","title":"Complete Genome Sequence of the Multiresistant Taxonomic Outlier Pseudomonas aeruginosa PA7","year":2010,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":283,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Office of Science; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Biology; Genetics; Genome; Housekeeping gene; Prophage; Gene; Genomic island; Mobile genetic elements; Pseudomonas aeruginosa; Whole genome sequencing; Insertion sequence; Multilocus sequence typing; Virulence; Microbiology; Sequence analysis; Horizontal gene transfer; Transposable element; Bacteria; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002305513,0.0007966601,0.0009056701,0.00152113,0.0005314405,0.0006644359,0.0005347739,0.0007350207,0.00247902],"category_scores_gemma":[0.0007100925,0.0002859683,0.0007290491,0.002050927,0.0002331714,0.0003123146,0.0004073507,0.0009344754,0.004052405],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004752165,"about_ca_system_score_gemma":0.001147099,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005802524,"about_ca_topic_score_gemma":0.003647326,"domain_scores_codex":[0.9996843,0.00003849589,0.00002898325,0.0000593941,0.0001386888,0.00005012085],"domain_scores_gemma":[0.9993733,0.00009580751,0.00008995683,0.0000565775,0.0002859089,0.0000985266],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001172963,0.000128918,0.00597924,0.001314827,0.00008879574,0.0008722768,0.0003617023,0.0006832728,0.9456624,0.0005051717,0.004871577,0.03835877],"study_design_scores_gemma":[0.000554309,0.001626662,0.378756,0.0007210775,0.0009168875,0.00548913,0.001791452,0.007566722,0.2270059,0.001966094,0.3732949,0.0003109057],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7100849,0.00701248,0.02203891,0.0008849987,0.0002743183,0.0005726248,0.2486838,0.00090244,0.009545535],"genre_scores_gemma":[0.2362556,0.004949971,0.03159276,0.0002227367,0.0001272608,0.0004184869,0.7218497,0.0004624669,0.004120996],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005802524,"threshold_uncertainty_score":0.01153749,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03826754812193823,"score_gpt":0.216202775566749,"score_spread":0.1779352274448107,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}