{"id":"W1971369615","doi":"10.1074/jbc.m402549200","title":"Biosynthesis of a Novel 3-Deoxy-D-manno-oct-2-ulosonic Acid-containing Outer Core Oligosaccharide in the Lipopolysaccharide of Klebsiella pneumoniae","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Biological Sciences; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Klebsiella pneumoniae; Residue (chemistry); Enterobacteriaceae; Lipopolysaccharide; Escherichia coli; Oligosaccharide; Chemistry; Biosynthesis; Biochemistry; Klebsiella; Glycosyltransferase; Mutant; Inner core; Biology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001169942,0.000525366,0.0003911792,0.0002251393,0.0001827576,0.0004974761,0.0002191009,0.0003378246,0.0002244029],"category_scores_gemma":[0.0002358006,0.0002654803,0.0004235549,0.0003307399,0.0002971681,0.0002425476,0.0004187374,0.0004129038,0.0002917264],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004600339,"about_ca_system_score_gemma":0.0005257329,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003336203,"about_ca_topic_score_gemma":0.002298123,"domain_scores_codex":[0.9998665,0.00001713301,0.00001783549,0.00002595132,0.00003993449,0.00003257664],"domain_scores_gemma":[0.9997334,0.00002860034,0.00006625729,0.00003055942,0.00004638235,0.00009479078],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004583599,0.000006356536,0.0003429642,0.00002397399,0.000002902535,0.00008229512,0.00003123696,0.00007559492,0.9990034,0.00003982444,0.000004946195,0.000340759],"study_design_scores_gemma":[0.0000171958,0.0002017166,0.02008178,0.00001806496,0.00004682674,0.000804127,0.0001920345,0.001409995,0.9755662,0.0001079774,0.001526485,0.00002752201],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996894,0.0003605861,0.002167667,0.00004951071,0.00001135465,0.00001670967,0.0002637341,0.00002103122,0.0002153067],"genre_scores_gemma":[0.9920369,0.0004084703,0.005540688,0.00003975489,0.000004245612,0.00001793868,0.0009207289,0.00002444109,0.001006707],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003336203,"threshold_uncertainty_score":0.00663352,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04830148707156779,"score_gpt":0.2642441783942966,"score_spread":0.2159426913227289,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}