{"id":"W1971461618","doi":"10.1007/s00122-013-2054-4","title":"Genome-wide identification and analysis of the B3 superfamily of transcription factors in Brassicaceae and major crop plants","year":2013,"lang":"en","type":"article","venue":"Theoretical and Applied Genetics","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":61,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta","funders":"Alberta Innovates Bio Solutions; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biology; Arabidopsis; Brassicaceae; Gene; Genome; Oryza sativa; Genetics; Quantitative trait locus; Brassica rapa; Ricinus; Protein domain; Transcription factor; Botany; Mutant","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001040967,0.00009798885,0.0001789751,0.00004574847,0.00003089722,0.0000127487,0.00008685343,0.00009247787,0.00001586871],"category_scores_gemma":[0.00001425434,0.00006793511,0.00003242097,0.0001034906,0.0003966461,0.000002024839,0.00006140554,0.00004455253,1.756786e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000001967366,"about_ca_system_score_gemma":0.000009685324,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001051748,"about_ca_topic_score_gemma":0.00001031656,"domain_scores_codex":[0.9993666,0.00002383281,0.0002126118,0.0002013536,0.00008209806,0.000113476],"domain_scores_gemma":[0.9996894,0.00001973007,0.00005742805,0.0001581729,0.0000247799,0.00005050018],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002840497,0.00003213742,0.004210898,0.00003281683,0.00005601367,2.95081e-8,0.0001850065,0.00001104586,0.989505,0.004914298,4.90857e-7,0.001023886],"study_design_scores_gemma":[0.0001932617,0.00004301396,0.2331364,0.000005171747,0.0001214529,5.861514e-7,0.0001836502,0.0002884362,0.7591816,0.006763542,0.0000137823,0.00006906663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980103,0.0003314961,0.001222852,0.00005205795,0.00001228134,0.0001963081,0.00003984398,0.000001818339,0.0001330499],"genre_scores_gemma":[0.9990731,0.0007422216,0.00008254896,0.00003829709,0.000005841466,0.00001038344,0.00002647014,0.000007065187,0.00001404186],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2303234,"threshold_uncertainty_score":0.2770313,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005204025360859876,"score_gpt":0.2011561178330916,"score_spread":0.1959520924722317,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}