{"id":"W1971727510","doi":"10.1017/s0031182005007559","title":"<i>Toxoplasma gondii</i>dense granule protein 3 (GRA3) is a type I transmembrane protein that possesses a cytoplasmic dilysine (KKXX) endoplasmic reticulum (ER) retrieval motif","year":2005,"lang":"en","type":"article","venue":"Parasitology","topic":"Toxoplasma gondii Research Studies","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Endoplasmic reticulum; Biology; Signal peptide; Transmembrane protein; ER retention; Toxoplasma gondii; Transmembrane domain; Peptide sequence; Cytoplasm; Protein targeting; Cell biology; Fusion protein; Secretory protein; Secretory pathway; Membrane protein; Molecular biology; Antibody; Recombinant DNA; Biochemistry; Secretion; Amino acid; Receptor; Genetics; Gene; Golgi apparatus; Membrane","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001064943,0.0002839321,0.0001768567,0.0001715557,0.0001982196,0.0003847294,0.0002004612,0.000340321,0.001190943],"category_scores_gemma":[0.000163313,0.00009365396,0.0003058407,0.0002643253,0.0002698941,0.0002032087,0.0002181952,0.0003906372,0.0009037382],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004356304,"about_ca_system_score_gemma":0.0001747388,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004930821,"about_ca_topic_score_gemma":0.0006529105,"domain_scores_codex":[0.9999151,0.00001353689,0.0000097986,0.00001854385,0.00002718474,0.00001582278],"domain_scores_gemma":[0.9999059,0.00001453694,0.00003913821,0.00001049104,0.00001269748,0.00001713589],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001088816,0.00001091645,0.000749931,0.00008011306,0.000006886385,0.0002366346,0.00002026254,0.00006212002,0.9953504,0.0002775376,0.0003553347,0.002740903],"study_design_scores_gemma":[0.00002225988,0.0001972971,0.02071787,0.0000255372,0.00003161716,0.006528296,0.000080342,0.001660748,0.9382405,0.0004367754,0.03204039,0.00001834645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.970717,0.003506786,0.01626287,0.0008309032,0.0002129615,0.00004450309,0.002584891,0.0007056911,0.005134408],"genre_scores_gemma":[0.9651172,0.001940447,0.01967995,0.0003012379,0.00003926375,0.00003758988,0.008638248,0.0001321649,0.004114017],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001190943,"threshold_uncertainty_score":0.003984034,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01832936737391054,"score_gpt":0.2835889331904888,"score_spread":0.2652595658165782,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}