{"id":"W1971738871","doi":"10.1038/nature12907","title":"A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes","year":2014,"lang":"en","type":"article","venue":"Nature","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":518,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; Biotechnology and Biological Sciences Research Council","keywords":"Bacteroidetes; Biology; Catabolism; Xyloglucan; Population; Metagenomics; Gene; Genetics; Biochemistry; Polysaccharide; Metabolism","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000150685,0.0001771809,0.0002041057,0.00006859912,0.00007308488,0.000026698,0.0002163292,0.0009455095,0.00003549446],"category_scores_gemma":[0.0000516564,0.0001581993,0.00007319263,0.0001006862,0.00005390788,0.0000025431,0.00006291943,0.0008131636,0.00001190944],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001567363,"about_ca_system_score_gemma":0.00006635937,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007237641,"about_ca_topic_score_gemma":0.000750974,"domain_scores_codex":[0.9988958,0.0001034504,0.0001856615,0.0003717383,0.0000831498,0.0003601743],"domain_scores_gemma":[0.9994637,0.00000795038,0.00006229292,0.0003182937,0.00005330916,0.00009449917],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002089493,0.00001975568,0.004771577,0.00002262949,0.00001727968,0.000001914039,0.00004523401,0.000006494001,0.9911556,0.0002902551,0.002682628,0.000965726],"study_design_scores_gemma":[0.001816534,0.0003372357,0.4621765,0.00003834031,0.00003882172,0.00003265681,0.00004101854,0.00003609567,0.2070584,0.0004705767,0.3273933,0.0005605249],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995385,0.00245472,0.00005760114,0.0004605372,0.0001658686,0.0001664498,0.00001700846,0.00001359394,0.001279222],"genre_scores_gemma":[0.9966133,0.0001041951,0.0004306258,0.001854169,0.0003292125,0.000009651057,0.0001424658,0.00002623989,0.000490177],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7840972,"threshold_uncertainty_score":0.7292635,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003286903467508295,"score_gpt":0.2541212944152171,"score_spread":0.2508343909477088,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}