{"id":"W1971862202","doi":"10.1016/j.anaerobe.2009.01.001","title":"Physical and genetic characterization of an outer-membrane protein (OmpM1) containing an N-terminal S-layer-like homology domain from the phylogenetically Gram-positive gut anaerobe Mitsuokella multacida","year":2009,"lang":"en","type":"article","venue":"Anaerobe","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Lethbridge; Health Canada; Agriculture and Agri-Food Canada","funders":"","keywords":"Bacterial outer membrane; Porin; Cell envelope; Molecular mass; Peptide sequence; Biology; Biochemistry; Outer membrane efflux proteins; Amino acid; Gel electrophoresis; Homology (biology); S-layer; Peptidoglycan; Membrane protein; Molecular biology; Cell wall; Membrane; Gene; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001599365,0.0004424725,0.0002587691,0.0002875628,0.0003213998,0.0003749001,0.0002649396,0.0003628416,0.0004195167],"category_scores_gemma":[0.0003811347,0.0002212326,0.0002793542,0.000382924,0.0003483466,0.0003169239,0.0003377187,0.0006098116,0.0003446506],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003635272,"about_ca_system_score_gemma":0.0003333376,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001985258,"about_ca_topic_score_gemma":0.00164919,"domain_scores_codex":[0.9998947,0.00001356897,0.00001082742,0.0000205626,0.00004211968,0.00001821796],"domain_scores_gemma":[0.9996585,0.00009214661,0.00009221323,0.00004584186,0.00005589635,0.00005545935],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007033748,0.00003937925,0.0003787411,0.00003441851,0.000003416795,0.00008663332,0.00004016927,0.00004374611,0.9986807,0.00006225549,0.00002377099,0.00053646],"study_design_scores_gemma":[0.00003690151,0.0003602712,0.05894991,0.00001572856,0.00005325786,0.001327761,0.0003433955,0.001104152,0.9330429,0.0001700942,0.004573497,0.00002208135],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974926,0.0003303485,0.0009482984,0.000137088,0.00001438066,0.00001159187,0.0005368978,0.00001411656,0.0005147926],"genre_scores_gemma":[0.9919183,0.0003314845,0.001947651,0.00006044617,0.00001282961,0.00002427107,0.003492076,0.0000274143,0.002185563],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001985258,"threshold_uncertainty_score":0.003947377,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007025871339701889,"score_gpt":0.2364026605823028,"score_spread":0.2293767892426009,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}