{"id":"W1971926330","doi":"10.1002/ibd.21171","title":"The path to Crohnʼs disease: Is mucosal pathology a secondary event?","year":2009,"lang":"en","type":"review","venue":"Inflammatory Bowel Diseases","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Disease; Pathology; Intracellular parasite; Crohn's disease; Immunology; Biology; Macrophage; Pathogenesis; Inflammatory bowel disease; Intracellular; Gastrointestinal tract; Intestinal mucosa; Medicine; Immune system; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.0004429445,0.001465595,0.001237404,0.0002408129,0.0007630389,0.0003197464,0.001921245,0.0006729445,0.0002024358],"category_scores_gemma":[0.0006222272,0.001149397,0.001990202,0.0002356265,0.0003512969,0.0000248352,0.0008315847,0.0005846455,0.001003027],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001622329,"about_ca_system_score_gemma":0.003358311,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001486634,"about_ca_topic_score_gemma":0.00001674471,"domain_scores_codex":[0.993769,0.0008854548,0.001496657,0.001785711,0.0006991684,0.001364048],"domain_scores_gemma":[0.9941757,0.0001210854,0.0007007166,0.002981846,0.0002620702,0.001758638],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00114836,0.0004154315,0.001021783,0.01373823,0.0008662257,0.01449235,0.00006539855,0.0000147394,0.000009236905,0.0005418619,0.3012015,0.6664849],"study_design_scores_gemma":[0.000470144,0.0001029787,0.01757312,0.002028242,0.001156255,0.00008668944,0.00001746562,0.000004259957,0.000001381478,0.000228905,0.9769604,0.001370112],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001517358,0.9903872,0.00003384458,0.0001878096,0.0008628427,0.002590462,0.00379159,0.0001670992,0.0004617664],"genre_scores_gemma":[0.0002812154,0.9891953,0.00003480889,0.002523049,0.001845443,0.001478912,0.001831005,0.0002946523,0.002515628],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.675759,"threshold_uncertainty_score":0.9998093,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009603219040439237,"score_gpt":0.2771616103322528,"score_spread":0.2675583912918135,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}