{"id":"W1972395484","doi":"10.1128/jcm.01255-07","title":"<i>Salmonella enterica</i> Serovar Senftenberg Human Clinical Isolates Lacking SPI-1","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":85,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Natural Science Foundation of China; Howard Hughes Medical Institute","keywords":"Salmonella enterica; Biology; Serotype; Microbiology; Virulence; Salmonella; Multilocus sequence typing; Pathogenicity island; Virology; Enteritis; Bacteria; Gene; Genotype; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003904216,0.0003210749,0.001767082,0.00003470615,0.0002546927,0.00001942193,0.0008374239,0.0007886917,0.0005223413],"category_scores_gemma":[0.001234583,0.0001282694,0.001304227,0.0002394136,0.0007871692,0.0001342272,0.0002282754,0.001232448,0.0001751428],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002247181,"about_ca_system_score_gemma":0.0000502617,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004066129,"about_ca_topic_score_gemma":0.00004275942,"domain_scores_codex":[0.9929424,0.001809097,0.003999792,0.0005349175,0.00008685069,0.0006269329],"domain_scores_gemma":[0.9933094,0.003669642,0.002122495,0.0001613535,0.000349566,0.0003874927],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003337931,0.0005448954,0.6809888,0.000004079182,0.0001722695,0.0001519965,0.00002201968,0.000001793386,0.2871243,0.00004004896,0.01880355,0.01181249],"study_design_scores_gemma":[0.001482955,0.004583821,0.6792165,0.00005784594,0.00009434683,0.004186356,0.00008075279,0.000007972923,0.001138944,0.0006602359,0.308048,0.0004423091],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942229,0.0006610327,0.00001904011,0.002200475,0.00212531,0.0001159612,0.00002079166,0.00004048574,0.000594017],"genre_scores_gemma":[0.9889534,0.001816735,0.0006173882,0.004518603,0.003633516,0.000001410154,0.000031623,0.000004440613,0.0004228513],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2892444,"threshold_uncertainty_score":0.6083113,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1422259704701392,"score_gpt":0.3776415344227955,"score_spread":0.2354155639526563,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}