{"id":"W1972602976","doi":"10.1371/journal.pone.0055594","title":"Pseudomonas aeruginosa PA1006, Which Plays a Role in Molybdenum Homeostasis, Is Required for Nitrate Utilization, Biofilm Formation, and Virulence","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Canadian Institutes of Health Research; University of Rochester; American Diabetes Association; Centre National de la Recherche Scientifique; Cystic Fibrosis Foundation Therapeutics; Cystic Fibrosis Foundation","keywords":"Virulence; Biofilm; Pseudomonas aeruginosa; Molybdenum cofactor; Quorum sensing; Biology; Microbiology; Nitrate reductase; Mutant; Biochemistry; Gene; Bacteria; Enzyme; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007915812,0.0005470323,0.0003050481,0.0002746827,0.0002398462,0.0003206118,0.0002611692,0.0004413362,0.001072942],"category_scores_gemma":[0.000249849,0.0001755028,0.0002966006,0.0002363865,0.0002379438,0.0001943121,0.0003998551,0.0005414405,0.0008130469],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002314526,"about_ca_system_score_gemma":0.000199573,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009647034,"about_ca_topic_score_gemma":0.001018629,"domain_scores_codex":[0.999868,0.00001891058,0.00001042715,0.00001936665,0.00006651649,0.00001682142],"domain_scores_gemma":[0.9998273,0.00002079819,0.00006399394,0.00002060715,0.00002141011,0.00004580988],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003478309,0.00001611795,0.000402444,0.00002251061,0.000002199,0.00009689022,0.000008292041,0.00003922671,0.9981193,0.00004435281,0.0000378524,0.001176066],"study_design_scores_gemma":[0.00001349851,0.0002079377,0.02598433,0.0000146433,0.00001330633,0.002842739,0.00009158446,0.001865175,0.9635225,0.0002062363,0.005223773,0.00001415336],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9920499,0.0008924034,0.005101278,0.0002601356,0.00002571345,0.00002128534,0.000638752,0.0001898317,0.0008206916],"genre_scores_gemma":[0.9881672,0.0005732032,0.006329874,0.00007391535,0.000007987273,0.00002994144,0.001432181,0.00005404287,0.003331564],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001072942,"threshold_uncertainty_score":0.003589332,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03102982791536283,"score_gpt":0.2307459384652103,"score_spread":0.1997161105498475,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}