{"id":"W1972727051","doi":"10.1007/s11103-012-9913-2","title":"Integration of deep transcript and targeted metabolite profiles for eight cultivars of opium poppy","year":2012,"lang":"en","type":"article","venue":"Plant Molecular Biology","topic":"Berberine and alkaloids research","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":false,"ca_institutions":"Plant Biotechnology Institute; University of Calgary","funders":"","keywords":"Benzylisoquinoline; Opium Poppy; Noscapine; Biology; Poppy; Papaver; Metabolite; Papaverine; Thebaine; Functional genomics; Pyrosequencing; Genomics; Computational biology; Expressed sequence tag; Gene; Complementary DNA; Genetics; Codeine; Genome; Botany; Alkaloid; Biochemistry; Morphine; Pharmacology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001893141,0.00008479376,0.0002838578,0.0001016149,0.00001336941,0.000001321455,0.00004181772,0.00009292363,0.00001928989],"category_scores_gemma":[0.0001126884,0.00005916928,0.00006561594,0.00007717498,0.00009060629,0.0000266192,0.00001437956,0.00007273335,7.09258e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004738919,"about_ca_system_score_gemma":0.00002013016,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005280048,"about_ca_topic_score_gemma":0.000003311281,"domain_scores_codex":[0.9993541,0.00006887965,0.0001942443,0.0001151016,0.00006298433,0.0002046837],"domain_scores_gemma":[0.9996378,0.00004888905,0.00005218185,0.00009992881,0.00008906302,0.00007207644],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002425922,0.00008688373,0.005127894,0.0001333763,0.00009731,0.000001430006,0.0002077071,9.334144e-8,0.9821164,0.007068541,0.00003735716,0.004880388],"study_design_scores_gemma":[0.000812867,0.0003429376,0.007974177,0.00002193798,0.00007835097,0.00003115223,0.00006980718,0.0002117233,0.9854246,0.0001994693,0.004771432,0.00006154165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9568232,0.006540301,0.03505481,0.0002867025,0.00007712976,0.0005655389,0.0003905315,0.000007846995,0.0002538908],"genre_scores_gemma":[0.9897001,0.0001754995,0.009040514,0.00006324468,0.00003976279,0.00003614613,0.0008961431,0.000009039404,0.00003949074],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03287691,"threshold_uncertainty_score":0.2412853,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02341544126141884,"score_gpt":0.3239623101389973,"score_spread":0.3005468688775784,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}