{"id":"W1972976610","doi":"10.3390/life5010085","title":"Pilin Processing Follows a Different Temporal Route than That of Archaellins in Methanococcus maripaludis","year":2015,"lang":"en","type":"article","venue":"Life","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pilin; Pilus; Biology; Methanococcus; Glycosylation; Signal peptide; Biochemistry; Microbiology; Peptide sequence; Gene; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003071883,0.000129024,0.0001956723,0.00009601748,0.00002289371,0.00001695309,0.0001932842,0.0001182324,0.00001945889],"category_scores_gemma":[0.0001808834,0.0001066878,0.00007360896,0.000136053,0.00006644023,0.000005358196,0.0001436427,0.0001167272,0.000006488567],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001954244,"about_ca_system_score_gemma":0.0002239905,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003342041,"about_ca_topic_score_gemma":0.001042853,"domain_scores_codex":[0.9988752,0.0001084068,0.0002289864,0.0002593617,0.0002818943,0.0002461614],"domain_scores_gemma":[0.9993752,0.000008363161,0.00008405762,0.0002582774,0.00008294681,0.0001911423],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009989321,0.0004910539,0.7553101,0.0001908425,0.00007475533,0.00002053438,0.001066007,0.0001942726,0.2266951,0.00010377,0.001210764,0.01364393],"study_design_scores_gemma":[0.006105961,0.001184057,0.1048805,0.0001623257,0.00002663307,0.000009345722,0.001321799,0.004167166,0.8396318,0.00107168,0.04072598,0.0007126977],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995096,0.0008274881,0.001454877,0.0002809042,0.00005963775,0.0003047948,0.00001527613,0.000008564989,0.001952461],"genre_scores_gemma":[0.9974588,0.00003901268,0.0005526806,0.00007680195,0.00008210971,0.00004347666,0.00008373833,0.00001619474,0.001647187],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6504295,"threshold_uncertainty_score":0.4350602,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06490642294437093,"score_gpt":0.3153038775494981,"score_spread":0.2503974546051271,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}