{"id":"W1973100489","doi":"10.1371/journal.pone.0058640","title":"The Complete Genome Sequence of the Plant Growth-Promoting Bacterium Pseudomonas sp. UW4","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":197,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"","keywords":"Biology; Genome; Whole genome sequencing; Genetics; Gene; Pseudomonas; Microbiology; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001326361,0.00008460479,0.0001204509,0.000003816514,0.0004346142,0.00007805099,0.0004766779,0.00003350695,0.0003137894],"category_scores_gemma":[0.0000693831,0.00002263001,0.00005781125,0.0001227397,0.0001013639,0.0001168022,0.0001459321,0.0001697879,0.0001022494],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001663104,"about_ca_system_score_gemma":0.000004849443,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001575466,"about_ca_topic_score_gemma":0.0002609246,"domain_scores_codex":[0.9992591,0.00009202215,0.0001925052,0.000112014,0.0001449113,0.0001994247],"domain_scores_gemma":[0.9993722,0.000261429,0.0001298868,0.00009320697,0.0001086546,0.00003464942],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000004413285,0.0001297066,0.002126149,0.000006445357,0.0000265362,3.068047e-7,0.00005271619,7.750854e-8,0.9971524,0.000048068,0.00008197731,0.0003712315],"study_design_scores_gemma":[0.0000985069,0.0001975709,0.7320256,0.0001943186,0.00003720808,0.00003258425,0.0003471984,0.0002890177,0.2597872,0.0005793884,0.006186592,0.0002248727],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960321,0.00004494336,1.600217e-7,0.002739414,0.00006946846,0.0002145056,0.0002648601,0.00001880189,0.000615711],"genre_scores_gemma":[0.9992298,0.00008267463,0.00004665971,0.0001427502,0.00007562857,0.00001591166,0.00004513749,7.161358e-7,0.0003606615],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7373652,"threshold_uncertainty_score":0.3435774,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06976667071618897,"score_gpt":0.1992317389985561,"score_spread":0.1294650682823672,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}