{"id":"W1973325700","doi":"10.1038/nmeth1007-783","title":"The protein microscope: incorporating mass spectrometry into cell biology","year":2007,"lang":"en","type":"article","venue":"Nature Methods","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":21,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University","funders":"Vetenskapsrådet; Genome Canada; Natural Sciences and Engineering Research Council of Canada; Knut och Alice Wallenbergs Stiftelse; McGill University","keywords":"Mass spectrometry; Microscope; Proteomics; Mass spectrometry imaging; Chemistry; Computational biology; Biology; Biophysics; Cell biology; Chromatography; Biochemistry; Physics; Gene; Optics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00160662,0.0001634355,0.0001554296,0.00004636722,0.0003553565,0.00003608477,0.0004512804,0.0005272491,0.00003890064],"category_scores_gemma":[0.0002646607,0.0001183366,0.00006993931,0.0003470159,0.0001280345,0.00003568847,0.0001126757,0.001387211,0.000005683453],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001054469,"about_ca_system_score_gemma":0.0000351636,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001044739,"about_ca_topic_score_gemma":0.000004853817,"domain_scores_codex":[0.9989415,0.00006158999,0.0002869516,0.0003188511,0.00007994711,0.0003111963],"domain_scores_gemma":[0.9986932,0.0004085503,0.0002258468,0.0005338374,0.00007461622,0.00006390723],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001444597,0.00001310018,0.0001163354,0.00002204082,0.000005582302,0.000001063233,0.00001280918,4.65361e-7,0.9460883,0.01751929,0.00004716503,0.03615936],"study_design_scores_gemma":[0.00007851356,0.00001207829,0.000006325572,0.000008950839,0.000004413836,0.000001959422,0.00003950677,0.00002205838,0.7955016,0.1360738,0.06813393,0.000116927],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.02189537,0.002028296,0.9422868,0.0003648301,0.0000681104,0.0002625014,0.000006325633,0.0001815362,0.03290622],"genre_scores_gemma":[0.1001366,0.00002535995,0.8982052,0.0001116729,0.000217458,0.00009155118,0.00001323533,0.00002826665,0.001170705],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.1505868,"threshold_uncertainty_score":0.6026821,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009010331839024749,"score_gpt":0.3805724599151972,"score_spread":0.3715621280761725,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}