{"id":"W1973370987","doi":"10.4161/mge.23498","title":"IS-mediated loss of virulence by<i><i>Aeromonas salmonicida</i></i>","year":2013,"lang":"en","type":"article","venue":"Mobile Genetic Elements","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Institut Universitaire de Cardiologie et de Pneumologie de Québec","funders":"","keywords":"Aeromonas salmonicida; Virulence; Plasmid; Pathogen; Biology; Microbiology; Gene; Genome; Type three secretion system; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001147224,0.0002090488,0.0002127734,0.0000359673,0.00006550195,0.00002316457,0.0003935616,0.0001020838,0.0004919322],"category_scores_gemma":[0.00004956391,0.0001969691,0.00008053628,0.0001186313,0.000175238,0.000005671685,0.000367955,0.00007411354,0.0001941253],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002096369,"about_ca_system_score_gemma":0.00005605573,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001276588,"about_ca_topic_score_gemma":0.00001156955,"domain_scores_codex":[0.9982831,0.00006728969,0.0004075411,0.0004351262,0.0003274698,0.0004794417],"domain_scores_gemma":[0.9990102,0.00001547258,0.0001402587,0.000516474,0.0001883835,0.0001291897],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001802593,0.0001204117,0.04255993,0.000032208,0.0001079166,0.000001508918,0.00004537878,0.000004451671,0.9264062,4.164574e-7,0.02814479,0.002558776],"study_design_scores_gemma":[0.0008822493,0.0008038103,0.03557562,0.00001996524,0.0000157064,0.00000335487,0.00006816829,0.00003912931,0.9183318,0.00003310336,0.04396888,0.0002582084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963704,0.002133033,0.0001100273,0.0000916123,0.00007892604,0.000716572,0.0001494133,0.00001162326,0.0003383826],"genre_scores_gemma":[0.9955741,0.001652209,0.0008184757,0.0003670877,0.00006204154,0.0004899939,0.0001580715,0.00003187724,0.0008461567],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0158241,"threshold_uncertainty_score":0.8032168,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006280292979266137,"score_gpt":0.2559358188172047,"score_spread":0.2496555258379386,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}