{"id":"W1973494268","doi":"10.1186/1471-2164-14-162","title":"Sequencing and annotation of the Ophiostoma ulmigenome","year":2013,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":48,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children; Genome Canada; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Dutch elm disease; Genome; Computational biology; Genetics; Population; Gene; Genome project; Whole genome sequencing; Ceratocystis; Fungus; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005135576,0.0008606649,0.0005772823,0.001932944,0.0007623299,0.0007805281,0.000483327,0.0006952516,0.001503098],"category_scores_gemma":[0.001509439,0.0002236011,0.0008175694,0.002507983,0.0002683309,0.0005473898,0.0007263051,0.0009861788,0.001053431],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007032248,"about_ca_system_score_gemma":0.001787282,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005189142,"about_ca_topic_score_gemma":0.007218732,"domain_scores_codex":[0.9996547,0.0000357292,0.00003237878,0.0001062829,0.0001080097,0.00006297747],"domain_scores_gemma":[0.999341,0.0001537458,0.0001355015,0.00006657996,0.0001822963,0.0001209428],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001129786,0.0002357114,0.01149882,0.001841492,0.00009144813,0.0008443937,0.001063708,0.003695922,0.9194573,0.0007015468,0.004249064,0.05519086],"study_design_scores_gemma":[0.0004463118,0.0008983423,0.4932969,0.0007889769,0.0008743624,0.003341973,0.002267723,0.04194746,0.2667961,0.003238418,0.1858742,0.0002291781],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8167981,0.003972554,0.03429215,0.0006943666,0.0001538073,0.0007240294,0.1371973,0.001770919,0.004396703],"genre_scores_gemma":[0.4573331,0.003379286,0.1190649,0.0003484647,0.00008757472,0.0006570226,0.4156816,0.0005421207,0.002906004],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005189142,"threshold_uncertainty_score":0.01031792,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01155996438350128,"score_gpt":0.1889975647384435,"score_spread":0.1774376003549422,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}