{"id":"W1973501824","doi":"10.1080/09687680701496507","title":"Eukaryotic major facilitator superfamily transporter modeling based on the prokaryotic GlpT crystal structure (Review)","year":2007,"lang":"en","type":"review","venue":"Molecular Membrane Biology","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Major facilitator superfamily; Transporter; Biology; Computational biology; SUPERFAMILY; Protein structure; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006593668,0.001201857,0.002008198,0.0001944925,0.0001582442,0.00002302456,0.001076452,0.001282853,0.00020207],"category_scores_gemma":[0.0001719044,0.000768534,0.001363226,0.0003280812,0.0002648697,0.000004448845,0.0001268155,0.0008566267,0.00004109902],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004673843,"about_ca_system_score_gemma":0.0004715617,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000166818,"about_ca_topic_score_gemma":0.000008714953,"domain_scores_codex":[0.9954302,0.0006946664,0.001122885,0.001427926,0.0003370788,0.000987276],"domain_scores_gemma":[0.9975811,0.00008109398,0.000292724,0.001661132,0.0001405102,0.0002434892],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005577299,0.0007961079,0.00003649869,0.1098826,0.004076667,0.0006405129,0.00009851676,0.00201825,0.1644841,0.003888117,0.004468411,0.7090525],"study_design_scores_gemma":[0.00057284,0.0004455083,0.00000269156,0.003872505,0.001388617,0.0001031064,0.0000107614,0.0002487544,0.001864913,0.00002666086,0.9903609,0.001102781],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001491591,0.9888213,0.00570573,0.0001084171,0.0005608888,0.002228324,0.0006639074,0.00004322498,0.0003765736],"genre_scores_gemma":[0.006717236,0.9837689,0.0004383059,0.004222588,0.0004024916,0.0002084067,0.00384738,0.0001923303,0.0002023057],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9858925,"threshold_uncertainty_score":0.9994766,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02742237944380002,"score_gpt":0.2909057113593569,"score_spread":0.2634833319155568,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}