{"id":"W1973573308","doi":"10.1371/journal.ppat.1002348","title":"Multiple Candidate Effectors from the Oomycete Pathogen Hyaloperonospora arabidopsidis Suppress Host Plant Immunity","year":2011,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":229,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; Plant Biotechnology Institute","funders":"FP7 People: Marie-Curie Actions; Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Deutsche Forschungsgemeinschaft","keywords":"Oomycete; Arabidopsis; Pseudomonas syringae; Effector; Biology; Downy mildew; Arabidopsis thaliana; Plant Immunity; Pathosystem; Type three secretion system; Callose; Virulence; Genetics; Pathogen; Microbiology; Botany; Mutant; Cell biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002266632,0.0002723301,0.0002778792,0.00001311308,0.0006774985,0.00008736725,0.0007168815,0.0001238429,0.001395975],"category_scores_gemma":[0.0001481214,0.00009494127,0.0001705307,0.0002015545,0.0001005123,0.0001857592,0.0002267502,0.0003873573,0.0002885598],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003659427,"about_ca_system_score_gemma":0.00001208961,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01752874,"about_ca_topic_score_gemma":0.006244509,"domain_scores_codex":[0.9983857,0.0003706982,0.0002956503,0.0003384515,0.0001782448,0.0004312381],"domain_scores_gemma":[0.9986508,0.0007151197,0.0001472532,0.0002815848,0.00007243138,0.0001327417],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001013176,0.0002498488,0.1174829,0.000002738644,0.00007145534,0.00002915394,0.0007801428,4.33302e-7,0.8789961,0.00000388369,0.0004763945,0.001805633],"study_design_scores_gemma":[0.0001976473,0.0001930556,0.8624113,0.00005367074,0.00006961724,0.00001909801,0.0009950279,0.00008284393,0.1265342,0.00002474058,0.009097359,0.0003213943],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9871033,0.0001790284,0.000001576237,0.00009682502,0.0003096491,0.0003467781,0.01120949,0.0001017828,0.0006515038],"genre_scores_gemma":[0.9975139,0.0001220025,0.00009856644,0.0001915795,0.0001792267,0.00004218154,0.001779278,0.000003736701,0.00006956304],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7524619,"threshold_uncertainty_score":0.9995169,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03238801778028941,"score_gpt":0.1928304439530892,"score_spread":0.1604424261727997,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}