{"id":"W1973859476","doi":"10.1186/1471-2180-14-63","title":"Prevalence of Staphylococcus aureus protein A (spa) mutants in the community and hospitals in Oxfordshire","year":2014,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":102,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Medical Research Council; National Institute for Health and Care Research; United Kingdom Clinical Research Collaboration; Wellcome Trust","keywords":"Biology; Staphylococcus aureus; Typing; Genetics; Multilocus sequence typing; Virulence; Gene; Genotype; Carriage; Microbiology; Staphylococcal infections; Virology; Bacteria; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004820417,0.0003585147,0.0003471684,0.001866622,0.0005458057,0.0008658837,0.0005615189,0.0006716413,0.002480636],"category_scores_gemma":[0.001716104,0.0003590671,0.0002221885,0.001265419,0.000843393,0.0004359388,0.001108238,0.0002981139,0.0002058541],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001347166,"about_ca_system_score_gemma":0.0009184802,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.07523505,"about_ca_topic_score_gemma":0.1062684,"domain_scores_codex":[0.9987949,0.0001964094,0.0002119694,0.0003020955,0.0001793399,0.0003153092],"domain_scores_gemma":[0.9962236,0.0004497237,0.001628469,0.00009894496,0.0005366051,0.001062761],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006595355,0.00001409227,0.9975563,0.00004253484,0.00001448944,0.0003294141,0.0004321796,0.00001511473,0.0006854488,0.00001171996,0.00007617075,0.0007564743],"study_design_scores_gemma":[0.000004039643,0.00007166349,0.9985014,0.0000144967,0.000006017438,0.0004323527,0.0008358156,0.00002239228,0.00004101383,0.00000266657,0.00006420492,0.000003930014],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994519,0.0001722881,0.0000157382,0.00002596742,0.000003122231,0.000004811475,0.000170672,0.000001531377,0.0001538819],"genre_scores_gemma":[0.9996326,0.00009409853,0.00003484503,0.0000240225,0.000003608146,0.000004153374,0.000117605,6.902645e-7,0.0000884592],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07523505,"threshold_uncertainty_score":0.1495943,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01657100625816669,"score_gpt":0.2702762133137725,"score_spread":0.2537052070556058,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}