{"id":"W1973978578","doi":"10.1128/jb.00822-10","title":"Genetic and Mass Spectrometry Analyses of the Unusual Type IV-Like Pili of the Archaeon<i>Methanococcus maripaludis</i>","year":2010,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Biological Sciences; Queen's University","funders":"","keywords":"Pilus; Pilin; Complementation; Biology; Methanococcus; Mutant; Gene; Structural gene; Genetics; Biochemistry; Molecular biology; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001192904,0.0001008795,0.0002279779,0.00003772398,0.0000310034,0.000004588208,0.0002959454,0.0001659055,0.00002976795],"category_scores_gemma":[0.0001558423,0.0000523872,0.0001329053,0.0001362157,0.000385573,0.000003864583,0.0001474102,0.0002321527,1.563009e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004033963,"about_ca_system_score_gemma":0.00006560313,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007138793,"about_ca_topic_score_gemma":0.000007924576,"domain_scores_codex":[0.9992157,0.0001032651,0.0003621117,0.0001126734,0.00009095966,0.000115284],"domain_scores_gemma":[0.9990689,0.00002326107,0.0004787282,0.000227747,0.0001596462,0.00004178365],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001164713,0.00001192869,0.0490771,0.00001632014,0.00006496031,5.095704e-7,0.00001773897,0.0000015763,0.9502113,0.00001058707,0.00003484726,0.0004366995],"study_design_scores_gemma":[0.0001700837,0.0001945168,0.4005518,0.000006871334,0.00003770779,0.0001036185,0.00000873362,0.000005323552,0.5981162,0.0002181577,0.000545124,0.00004183856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986122,0.0002981376,0.0000702972,0.0002482683,0.0006584669,0.00005767064,0.00001498293,7.349934e-7,0.00003923224],"genre_scores_gemma":[0.9986167,0.0001578424,0.0008222195,0.0001131685,0.0002203778,4.284973e-7,0.000004100733,0.000006639901,0.00005853121],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.352095,"threshold_uncertainty_score":0.2136288,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0112120504726567,"score_gpt":0.2583211259767658,"score_spread":0.2471090755041091,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}