{"id":"W1974721513","doi":"10.1016/j.meegid.2011.04.027","title":"European 1: A globally important clonal complex of Mycobacterium bovis","year":2011,"lang":"en","type":"article","venue":"Infection Genetics and Evolution","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":125,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Wellcome Trust","keywords":"Biology; Mycobacterium bovis; Mainland; Mycobacterium tuberculosis complex; Tuberculosis; Mycobacterium tuberculosis; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002396734,0.00009478737,0.0001458192,0.0001003369,0.00005443681,0.00001260727,0.00003165241,0.00004781659,0.000273183],"category_scores_gemma":[0.00005509014,0.00007692969,0.00006160636,0.0001363237,0.00008298926,0.00004195912,0.00005426777,0.0000757658,0.00002248005],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000431524,"about_ca_system_score_gemma":0.00005519311,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005205408,"about_ca_topic_score_gemma":0.00004696711,"domain_scores_codex":[0.9991362,0.00005798046,0.0002727135,0.0001645546,0.000188411,0.0001801327],"domain_scores_gemma":[0.9993832,0.00001143165,0.00009632063,0.0001517177,0.0001858672,0.0001714684],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001612981,0.0001710423,0.9421667,0.00007984418,0.00003961964,0.00001170989,0.00007990946,6.205674e-7,0.05349849,0.0003075548,0.001090863,0.002392313],"study_design_scores_gemma":[0.0005632857,0.0008179077,0.9908206,0.0000328591,0.00005226008,0.0001029498,0.00001030018,0.0003160449,0.002357362,0.0002360189,0.00461107,0.00007937785],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9894618,0.0002823838,0.001011614,0.00006167546,0.0001317729,0.0001694543,0.00002653422,0.00003396097,0.008820821],"genre_scores_gemma":[0.9975237,0.001268057,0.0009159965,0.0000661778,0.0001325089,0.000005136466,0.00003693356,0.00001162949,0.00003990459],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05114113,"threshold_uncertainty_score":0.3137102,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04551549996916632,"score_gpt":0.2733637799985008,"score_spread":0.2278482800293345,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}