{"id":"W1974783621","doi":"10.1021/bi800097h","title":"Functional and Structural Characterization of Four Glutaminases from Escherichia coli and Bacillus subtilis","year":2008,"lang":"en","type":"article","venue":"Biochemistry","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":126,"is_retracted":false,"has_abstract":true,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"Argonne National Laboratory; National Institute of General Medical Sciences; University of Toronto","keywords":"Amidohydrolase; Bacillus subtilis; Escherichia coli; Biochemistry; Glutaminase; Glutamine; Chemistry; Asparagine; Alanine; Enzyme; Autolysin; Deamidation; Glutamine amidotransferase; Stereochemistry; Biology; Amino acid; Peptidoglycan; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003462676,0.0001352033,0.0001279799,0.0000143099,0.00007382922,0.00001064888,0.00007554927,0.0001841819,0.00004015588],"category_scores_gemma":[0.00007022137,0.0001291684,0.00004087568,0.00005424121,0.0002931713,0.000003950219,0.0001427168,0.00007727616,9.471124e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006602339,"about_ca_system_score_gemma":0.00005966729,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003184034,"about_ca_topic_score_gemma":0.000001459893,"domain_scores_codex":[0.9992132,0.00001847442,0.0001453907,0.0003299628,0.0001427385,0.0001502228],"domain_scores_gemma":[0.999556,0.000009282273,0.00005954343,0.0001823938,0.00008155518,0.0001112409],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001174695,0.00001638456,0.00561122,0.00003836313,0.00003375305,0.000004513816,0.00001328144,1.233054e-7,0.9932668,0.000002476192,0.0001647649,0.0007309086],"study_design_scores_gemma":[0.0003975719,0.00005371474,0.0764536,0.00001034955,0.00001021187,0.00003165721,0.00001563994,0.00004479953,0.9222385,0.00001338611,0.0005976111,0.0001329785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985068,0.0009238429,0.0001426384,0.00006920461,0.00003344408,0.00007442942,0.000154257,0.000007375782,0.00008797689],"genre_scores_gemma":[0.9978319,0.0003821896,0.0002437944,0.00007204558,0.0001566188,0.000008384183,0.0007979251,0.00001297148,0.0004941502],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07102826,"threshold_uncertainty_score":0.5267336,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01495974685481498,"score_gpt":0.2176708116618522,"score_spread":0.2027110648070372,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}