{"id":"W1975351420","doi":"10.1155/2015/198560","title":"Phylogenomic and Molecular Demarcation of the Core Members of the Polyphyletic<i>Pasteurellaceae</i>Genera<i>Actinobacillus</i>,<i>Haemophilus</i>, and<i>Pasteurella</i>","year":2015,"lang":"en","type":"article","venue":"International Journal of Genomics","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Polyphyly; Actinobacillus; Haemophilus; Phylogenetic tree; Pasteurella; Sensu; Evolutionary biology; Actinobacillus pleuropneumoniae; Clade; Zoology; Microbiology; Genetics; Genus; Gene; Serotype; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001856683,0.0001721651,0.0001544022,0.0006013376,0.0002167603,0.0002558144,0.0001208501,0.0002170784,0.0004593083],"category_scores_gemma":[0.0003763513,0.0001244436,0.0002067936,0.0005806866,0.0001631013,0.0001656444,0.0002325063,0.0003958557,0.0001884304],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001419116,"about_ca_system_score_gemma":0.0002245683,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00143509,"about_ca_topic_score_gemma":0.001503866,"domain_scores_codex":[0.9998581,0.00002666286,0.000006694186,0.00004107049,0.0000278704,0.00003950415],"domain_scores_gemma":[0.9997134,0.00005178027,0.0001001008,0.00002599202,0.00005037561,0.00005828528],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005140714,0.00005219963,0.09529698,0.00009552103,0.00004143169,0.0001643356,0.0006127462,0.0006647359,0.8831288,0.0002964002,0.0001407147,0.01899207],"study_design_scores_gemma":[0.00001138557,0.0002564297,0.9581606,0.00003449098,0.00008506043,0.0005996481,0.0006219651,0.005162324,0.03137127,0.0002549197,0.003425388,0.00001657533],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980122,0.0002749197,0.001034968,0.0000326557,0.000002689077,0.000006876989,0.0002507126,0.00001064501,0.0003742024],"genre_scores_gemma":[0.9940002,0.0002093018,0.003608332,0.00004006804,0.00000545293,0.00001194071,0.001626774,0.00001130831,0.0004866777],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00143509,"threshold_uncertainty_score":0.002853513,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01893805628691815,"score_gpt":0.2551027877175229,"score_spread":0.2361647314306047,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}