{"id":"W1975421239","doi":"10.1093/infdis/jiu613","title":"Global Origin and Transmission of Hepatitis C Virus Nonstructural Protein 3 Q80K Polymorphism","year":2014,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Hepatitis C virus research","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; BC Centre for Disease Control; AIDS Vancouver","funders":"Canadian Institutes of Health Research","keywords":"Simeprevir; Hepatitis C virus; Virology; Genotype; NS3; Biology; Virus; Protease inhibitor (pharmacology); Genetics; Flaviviridae; Polymorphism (computer science); Protease; Hepatitis C; Gene; Viral load; Ribavirin; Enzyme","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003314793,0.0001258463,0.0003438114,0.0001102503,0.0000971536,0.00001757096,0.0001115865,0.00005131869,0.0001814717],"category_scores_gemma":[0.0003573307,0.00007450632,0.0001231,0.0002133577,0.0002466278,0.0001190288,0.00002900112,0.0001835243,0.000004352586],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009292427,"about_ca_system_score_gemma":0.0002288792,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001624238,"about_ca_topic_score_gemma":0.000131697,"domain_scores_codex":[0.9985677,0.0002653098,0.0003849363,0.00008128211,0.0005105621,0.0001902033],"domain_scores_gemma":[0.9989448,0.0001169499,0.0002272798,0.0001671367,0.000244773,0.0002990324],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008249471,0.0001939003,0.8290242,0.0001798088,0.0001627877,0.00004733665,0.0001594571,0.00002031932,0.02023827,0.0002641957,0.0004898179,0.148395],"study_design_scores_gemma":[0.004577578,0.003133696,0.9722086,0.0007263464,0.0005289718,0.001449389,0.00003128619,0.0006795684,0.009655111,0.003357423,0.003452369,0.0001996235],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959191,0.001164538,0.001183311,0.0004233879,0.00007697783,0.0002622426,0.00003230145,0.0000162796,0.0009218765],"genre_scores_gemma":[0.9986156,0.0009039975,0.0001342964,0.0001008657,0.0001911831,0.000002648069,0.000001466023,0.00001243614,0.00003753932],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1481954,"threshold_uncertainty_score":0.3038279,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009589094015682817,"score_gpt":0.2835554010850105,"score_spread":0.2739663070693277,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}