{"id":"W1975643185","doi":"10.1038/nature13804","title":"Primate-specific endogenous retrovirus-driven transcription defines naive-like stem cells","year":2014,"lang":"en","type":"article","venue":"Nature","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":464,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Embryonic stem cell; Biology; Induced pluripotent stem cell; Stem cell; Cell biology; Retrovirus; Transcription factor; Endogenous retrovirus; Genetics; Cell culture; Gene; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003788027,0.0002491836,0.0003591842,0.0004177936,0.0004186416,0.001502719,0.0005064653,0.0004711301,0.003785254],"category_scores_gemma":[0.0003021746,0.0003842877,0.0002792535,0.0001985752,0.0004373492,0.0003754823,0.0003930194,0.001358761,0.002062564],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004925926,"about_ca_system_score_gemma":0.0002670761,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004290107,"about_ca_topic_score_gemma":0.001577999,"domain_scores_codex":[0.9995486,0.0000574711,0.00004064707,0.0001327684,0.0001407027,0.0000797507],"domain_scores_gemma":[0.9995814,0.00008868552,0.00007320265,0.00006598138,0.00005985553,0.000130985],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006146778,0.00001545288,0.0003865987,0.00002051359,0.000004610665,0.00009560897,0.0001062386,0.00008009766,0.9948041,0.001447386,0.0001586024,0.002819353],"study_design_scores_gemma":[0.00002405009,0.0001740715,0.003490409,0.00001773226,0.00001991255,0.0006334594,0.0001411737,0.001712531,0.9780632,0.0007208632,0.01498947,0.00001320113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9304178,0.00219424,0.04127293,0.0002963032,0.0002456941,0.0001835654,0.00198682,0.001153034,0.02224969],"genre_scores_gemma":[0.9620736,0.0007814351,0.0154814,0.0001912651,0.00005776954,0.00006127803,0.001645636,0.0005920936,0.01911552],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003785254,"threshold_uncertainty_score":0.01266295,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009989408700281237,"score_gpt":0.2435276358812255,"score_spread":0.2335382271809443,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}