{"id":"W1975987810","doi":"10.1093/nar/gki110","title":"Poxvirus Bioinformatics Resource Center: a comprehensive Poxviridae informational and analytical resource","year":2004,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; University of Oxford; Natural Sciences and Engineering Research Council of Canada; Defense Advanced Research Projects Agency; Medical College of Wisconsin","keywords":"Biodefense; GenBank; Poxviridae; Biology; Smallpox virus; Annotation; Smallpox; Variola virus; Virology; Bioinformatics; Computational biology; Database; Genetics; Vaccinia; Computer science; Vaccination; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001133971,0.0002818564,0.0003926292,0.000737779,0.0008973678,0.0001803705,0.0006941246,0.0004255427,0.0005563276],"category_scores_gemma":[0.0005459556,0.0002437953,0.000119572,0.0007657086,0.001813739,0.000417669,0.0009180757,0.001725386,0.003701515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002395529,"about_ca_system_score_gemma":0.0003108605,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001554252,"about_ca_topic_score_gemma":0.00001619034,"domain_scores_codex":[0.9966754,0.0004015052,0.0005870707,0.0003906165,0.0005159525,0.001429427],"domain_scores_gemma":[0.9981663,0.0005218025,0.00008464454,0.0005900021,0.0003675087,0.0002697708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.008261946,0.00226726,0.01189878,0.001010825,0.002132085,0.0004390701,0.023722,0.000400563,0.07051287,0.1015794,0.4696134,0.3081618],"study_design_scores_gemma":[0.004793042,0.0005889713,0.009536049,0.0001059822,0.00001301568,0.0004438089,0.003160521,0.0003437162,0.002835061,0.0007831519,0.9770527,0.000343984],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9086902,0.00192602,0.000211659,0.004075758,0.0001362595,0.000882585,0.0002565866,0.0002150776,0.08360589],"genre_scores_gemma":[0.9935974,0.0003583526,0.0007090898,0.001289935,0.000118915,0.00004247187,0.0004708265,0.00005117738,0.003361758],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5074393,"threshold_uncertainty_score":0.9970742,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04273165097209883,"score_gpt":0.3247360584484658,"score_spread":0.282004407476367,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}