{"id":"W1977003943","doi":"10.1128/jcm.03047-13","title":"Phenotypic and Genotypic Characterization of Canadian Clinical Isolates of Vibrio parahaemolyticus Collected from 2000 to 2009","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"ca_institutions":"Shared Health; Health Sciences Centre; BC Centre for Disease Control; Health Canada; University of Manitoba; Public Health Agency of Canada","funders":"Health Canada; Canadian Food Inspection Agency","keywords":"Vibrio parahaemolyticus; Biology; Microbiology; Hemolysin; Pulsed-field gel electrophoresis; Ribotyping; Serotype; Multilocus sequence typing; Genotype; Virulence; Typing; Population; Virology; Genetics; Gene; Bacteria; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002850452,0.0003706703,0.0003992179,0.001286001,0.001341892,0.0007885401,0.0005640341,0.0003472101,0.0005292696],"category_scores_gemma":[0.001473745,0.0002768259,0.0002937692,0.002403581,0.0004702922,0.0001624212,0.0003591432,0.0004258509,0.0001485246],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005963053,"about_ca_system_score_gemma":0.007517505,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9305509,"about_ca_topic_score_gemma":0.9557971,"domain_scores_codex":[0.9992409,0.00002501761,0.00004127044,0.0001155704,0.0004312245,0.0001461611],"domain_scores_gemma":[0.9986268,0.00005427326,0.0001342878,0.00003410232,0.0009641999,0.000186339],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003955273,0.00009132241,0.9374726,0.00015029,0.00007976175,0.000544585,0.002691659,0.0003817959,0.03864805,0.00008993805,0.00131542,0.01813907],"study_design_scores_gemma":[0.000006984009,0.00006359071,0.9944971,0.00001564716,0.00002485024,0.000405654,0.0009182544,0.0002354604,0.001911425,0.00001009965,0.001899419,0.00001153884],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955809,0.0003776847,0.0002206422,0.00009349725,0.0000102249,0.00005235745,0.002448728,0.000009115696,0.001206859],"genre_scores_gemma":[0.9933112,0.0005432873,0.0008527719,0.0001240899,0.000008900292,0.00001870082,0.004010726,0.000009247359,0.001121171],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06944913,"threshold_uncertainty_score":0.1397162,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02719121077593573,"score_gpt":0.3239282972366629,"score_spread":0.2967370864607272,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}