{"id":"W1977043873","doi":"10.1104/pp.107.110841","title":"Elucidating the Germination Transcriptional Program Using Small Molecules    ","year":2008,"lang":"en","type":"article","venue":"PLANT PHYSIOLOGY","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":121,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome Canada; University of Toronto","funders":"RIKEN; Ontario Genomics Institute; University of California, Riverside; University of Warwick; Ontario Genomics; Genome Canada","keywords":"Germination; Arabidopsis; Abscisic acid; Biology; Imbibition; Radicle; Transcriptome; Gibberellin; Seed dormancy; Dormancy; Gene expression; Cell biology; Gene; Botany; Mutant; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007685423,0.0001058314,0.0001254656,0.000009882298,0.000390078,0.00000938618,0.0001800481,0.00007991481,0.0001680059],"category_scores_gemma":[0.00002290215,0.00003645313,0.00007057146,0.0001507716,0.0001356303,0.000045941,0.00002507727,0.000113472,0.00002338447],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001063456,"about_ca_system_score_gemma":0.00001180617,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007952197,"about_ca_topic_score_gemma":0.00003721321,"domain_scores_codex":[0.9991992,0.0001365606,0.0001543362,0.0002100334,0.00007952082,0.0002203553],"domain_scores_gemma":[0.9995758,0.0002188528,0.00007939214,0.00004177276,0.00004967675,0.00003450574],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000239599,0.0000776896,0.0001086148,0.000002877752,0.000007773215,0.000002718818,0.0001207357,0.00006422339,0.9836271,0.001037898,0.00009121749,0.01483515],"study_design_scores_gemma":[0.0002150928,0.0003405797,0.9428132,0.00001291798,0.00001603783,0.0002521711,0.0002612456,0.01693617,0.01312504,0.002082933,0.02365388,0.0002907461],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986168,0.00008029798,0.00002177619,0.0005112276,0.0001310062,0.0001911184,0.00004488912,0.00007381257,0.0003290684],"genre_scores_gemma":[0.9984925,0.00002825841,0.0003336633,0.0004136815,0.0003007279,0.00003383978,0.0003351299,8.536828e-7,0.0000613299],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9705021,"threshold_uncertainty_score":0.3000204,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06207240258835228,"score_gpt":0.2502291129172323,"score_spread":0.18815671032888,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}