{"id":"W1977083134","doi":"10.1038/gene.2012.17","title":"Classical HLA-DRB1 and DPB1 alleles account for HLA associations with primary biliary cirrhosis","year":2012,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Biology; Allele; Genetics; Human leukocyte antigen; Primary biliary cirrhosis; Single-nucleotide polymorphism; HLA-DRB1; SNP; Gene; Genetic association; Linkage disequilibrium; Haplotype; Immunology; Antigen; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006956096,0.0003821451,0.0005095634,0.0008935317,0.0003609181,0.0006716541,0.0004847996,0.0005367443,0.006522255],"category_scores_gemma":[0.002778161,0.0002950781,0.0005765395,0.001327094,0.0004218456,0.0004788602,0.0005092446,0.0006130417,0.0005069567],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002397961,"about_ca_system_score_gemma":0.0002067544,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007762875,"about_ca_topic_score_gemma":0.0006168029,"domain_scores_codex":[0.9994325,0.0002372573,0.00005948121,0.0000897149,0.00006904193,0.0001120467],"domain_scores_gemma":[0.9984562,0.0006342894,0.0003996217,0.0001828632,0.0001003146,0.0002267067],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007609391,0.00004433174,0.9779478,0.00004895666,0.000357302,0.001005411,0.00007439237,0.0001473395,0.006900224,0.0004408516,0.0003469043,0.01192551],"study_design_scores_gemma":[0.00007089867,0.00009745835,0.9888358,0.00002178902,0.0003915611,0.006002089,0.000178016,0.001324805,0.0009175382,0.001312756,0.0008366487,0.00001066066],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967829,0.001323036,0.0005239735,0.0002056814,0.0000209636,0.000005095971,0.0001079767,0.00001264363,0.001017887],"genre_scores_gemma":[0.9993322,0.0001534085,0.0002135451,0.00003010531,0.00003476857,0.000002147998,0.00005700825,0.00000611216,0.0001705437],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006522255,"threshold_uncertainty_score":0.02181917,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02507706843827436,"score_gpt":0.263016730504094,"score_spread":0.2379396620658197,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}