{"id":"W1977743433","doi":"10.1074/jbc.275.13.9091","title":"Protein trans-Splicing and Cyclization by a Naturally Split Intein from the dnaE Gene ofSynechocystis Species PCC6803","year":2000,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":189,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Intein; Gene; RNA splicing; Trans-splicing; Genetics; Biology; Protein splicing; Computational biology; RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003017777,0.0001793761,0.0002264475,0.000006832388,0.00009396632,0.00005346599,0.0003336928,0.0003017052,0.0004469133],"category_scores_gemma":[0.0001738444,0.0001065238,0.0001255534,0.00005436314,0.00011791,0.000007327571,0.00003960779,0.000217663,0.000002122072],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001505853,"about_ca_system_score_gemma":0.00002805272,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009810939,"about_ca_topic_score_gemma":0.000001268337,"domain_scores_codex":[0.9989603,0.0000864739,0.0003728385,0.0002376888,0.0001605149,0.0001821861],"domain_scores_gemma":[0.9994193,0.00004837114,0.0001943536,0.000179287,0.00006595004,0.00009270089],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000233373,0.00003263836,0.0002135368,0.000009539159,0.00004864324,0.00000759399,0.00002306385,0.00000275967,0.9889165,0.000004284795,0.0003966045,0.01011151],"study_design_scores_gemma":[0.000355342,0.0001798564,0.0009874745,0.00005948818,0.00001794883,0.00007679412,0.00004958115,0.000006577434,0.9767702,0.0003072445,0.02104072,0.0001488061],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929501,0.00460352,0.001175523,0.0006843646,0.00002839521,0.000127189,0.00004635815,0.000006778756,0.0003777519],"genre_scores_gemma":[0.9953702,0.001617495,0.001358675,0.0002701262,0.0004414395,0.000007781581,0.00005592782,0.00001181648,0.0008665104],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02064411,"threshold_uncertainty_score":0.4893388,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01049044067573839,"score_gpt":0.2101814324781132,"score_spread":0.1996909918023748,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}