{"id":"W1977855861","doi":"10.1371/journal.pcbi.1003760","title":"Apoptotic Lymphocytes of H. sapiens Lose Nucleosomes in GC-Rich Promoters","year":2014,"lang":"en","type":"article","venue":"PLoS Computational Biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Nucleosome; Promoter; Molecular biology; Biology; Micrococcal nuclease; DNA; genomic DNA; Homo sapiens; Genetics; DNA sequencing; Histone; GC-content; Genome; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000822244,0.0002159552,0.0002378021,0.0001081743,0.00008818007,0.0001454603,0.000199668,0.0001629291,0.0005542659],"category_scores_gemma":[0.0001414248,0.0001238418,0.0001822701,0.0001639017,0.0001007451,0.00008107797,0.0001147257,0.0002182903,0.0001473018],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000198711,"about_ca_system_score_gemma":0.0001320717,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001496394,"about_ca_topic_score_gemma":0.002077893,"domain_scores_codex":[0.9999464,0.000004852606,0.000002154296,0.0000178279,0.00001974729,0.000009015956],"domain_scores_gemma":[0.9999528,0.00001696407,0.00001172079,0.00000367439,0.000006658145,0.000008239858],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002219655,0.00002424325,0.004461061,0.0001325529,0.00001999767,0.0001151709,0.00003220499,0.006414118,0.9822273,0.0001895312,0.00008764615,0.006074106],"study_design_scores_gemma":[0.00004906033,0.0003040738,0.04502564,0.00001379586,0.00007618727,0.0004216501,0.00008622601,0.1133246,0.8372613,0.0004881543,0.002928552,0.00002071402],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914008,0.0001488738,0.00744997,0.00001278663,0.000004601004,0.000006701383,0.0003956979,0.0001782628,0.0004022687],"genre_scores_gemma":[0.9842182,0.0001668044,0.01242346,0.00002828289,0.000002023564,0.00002031477,0.002165531,0.00007607986,0.0008992935],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001496394,"threshold_uncertainty_score":0.002975345,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009681178969928666,"score_gpt":0.2383408537896658,"score_spread":0.2286596748197371,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}